RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 JADE3Q92613 823 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TSLPQ969D9 159 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 NCLNQ969V3 563 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 FAM162AQ96A26 154 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CTHRC1Q96CG8 243 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 C16orf58Q96GQ5 468 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 RSRC1Q96IZ7 334 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 NSMCE2Q96MF7 247 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 MS4A4EQ96PG1 132 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 YIPF4Q9BSR8 244 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CNPPD1Q9BV87 410 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 NRSN2Q9GZP1 204 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 VN1R1Q9GZP7 353 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 TMEM38AQ9H6F2 299 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ANKRA2Q9H9E1 313 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 AKIRIN1Q9H9L7 192 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CPNE5Q9HCH3 593 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 ADAP2Q9NPF8 381 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 EQTNQ9NQ60 294 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 NXT1Q9UKK6 140 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 PCDHGA8Q9Y5G5 932 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CLDN16Q9Y5I7 305 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 CLCA3PQ9Y6N3 262 aa12.18□□□□□ -0.46
SHKBP1-209ENST00000595803 IGKV3D-11A0A0A0MRZ8 115 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 TCRBV16S1A1N1A0A5B0 115 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 AQP12BA6NM10 295 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 C9orf172C9J069 976 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 C5orf58C9J3I9 102 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ARPC2O15144 300 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ALOX12BO75342 701 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 FKBP6O75344 327 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 CREG1O75629 220 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 AGR2O95994 175 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ALOX5P09917 674 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 BMP2P12643 396 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC5A2P31639 672 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ERFP50548 548 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 POLE2P56282 527 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 CDK6Q00534 326 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 SCARB2Q14108 478 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 VEZF1Q14119 521 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 EXOSC7Q15024 291 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ADRM1Q16186 407 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 FXNQ16595 210 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 FHL5Q5TD97 284 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 FAAH2Q6GMR7 532 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC30A8Q8IWU4 369 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 AQP12AQ8IXF9 295 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 OR52R1Q8NGF1 315 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 MIPOL1Q8TD10 442 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 DAZLQ92904 295 aaKnown RBP12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 RAB8BQ92930 207 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 OR7D2Q96RA2 312 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 CRB3Q9BUF7 120 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 B3GNT4Q9C0J1 378 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 GORASP2Q9H8Y8 452 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 WDR54Q9H977 334 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 ZNF639Q9UID6 485 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 C3orf18Q9UK00 162 aa12.17□□□□□ -0.46
SHKBP1-209ENST00000595803 LRRK2Q5S007 2527 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 NBPF19A0A087WUL8 3843 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 A0A1W2PNU3 283 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 IDSB3KWA1 339 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 HMGN4O00479 90 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 MGRN1O60291 552 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SOX30O94993 753 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 CYC1P08574 325 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ARAFP10398 606 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 NR2F1P10589 423 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 GP1BBP13224 206 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 S1PR1P21453 382 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 RBMS1P29558 406 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 PCGF2P35227 344 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SOX18P35713 384 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 FUT7Q11130 342 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 GNA13Q14344 377 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ELAVL1Q15717 326 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 TBC1D25Q3MII6 688 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 ATAD3BQ5T9A4 648 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 INTS11Q5TA45 600 aaKnown RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 MFSD12Q6NUT3 480 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 AAGABQ6PD74 315 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC44A2Q8IWA5 706 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 CDRT4Q8N9R6 151 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 OR7G1Q8NGA0 311 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 OR5D16Q8NGK9 328 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 OR14A16Q8NHC5 309 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 NFKBIDQ8NI38 313 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 PTPMT1Q8WUK0 201 aaPredicted RBP12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC9A6Q92581 669 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 MAL2Q969L2 176 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 GIMAP5Q96F15 307 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SLC35A4Q96G79 324 aa12.16□□□□□ -0.46
SHKBP1-209ENST00000595803 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms