RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 KDELR2P33947 212 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PCGF2P35227 344 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PPP2R2BQ00005 443 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 LASP1Q14847 261 aaKnown RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 CCDC157Q569K6 752 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ZNF628Q5EBL2 1059 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ARHGAP40Q5TG30 622 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 PPP1R3BQ86XI6 285 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 SLC38A9Q8NBW4 561 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 AGBL5Q8NDL9 886 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 SIMC1Q8NDZ2 872 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 NUP43Q8NFH3 380 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 OR5D16Q8NGK9 328 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 DOK4Q8TEW6 326 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 ING2Q9H160 280 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 LANCL2Q9NS86 450 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 DDX18Q9NVP1 670 aaKnown RBP12.36□□□□□ -0.43
VRK3-205ENST00000593919 FAM118AQ9NWS6 357 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 RPS6KA6Q9UK32 745 aa12.36□□□□□ -0.43
VRK3-205ENST00000593919 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 LRP3O75074 770 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 DIRAS1O95057 198 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 SLC35E2P0CK97 266 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 ARAFP10398 606 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 NT5EP21589 574 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 TGM1P22735 817 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 AQP1P29972 269 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 PIGAP37287 484 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 MAGEA2P43356 314 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 HSD17B7P56937 341 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 EEF1A2Q05639 463 aaKnown RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 RBBP4Q09028 425 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 STX4Q12846 297 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 SCARB2Q14108 478 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 MYBPC3Q14896 1274 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 PRICKLE4Q2TBC4 344 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 TRMT12Q53H54 448 aaKnown RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 GPR141Q7Z602 305 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 OR2L13Q8N349 312 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 RAB8BQ92930 207 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 OTUB1Q96FW1 271 aaPredicted RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 HSH2DQ96JZ2 352 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 RDH12Q96NR8 316 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 OR1F2PQ96R84 312 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 YIPF4Q9BSR8 244 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 ALOXE3Q9BYJ1 711 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 AMBRA1Q9C0C7 1298 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 OR51I1Q9H343 314 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 EQTNQ9NQ60 294 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 USE1Q9NZ43 259 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 NTMQ9P121 344 aa12.35□□□□□ -0.43
VRK3-205ENST00000593919 IFT80Q9P2H3 777 aaPredicted RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 RSL24D1Q9UHA3 163 aaKnown RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 CNOT1A5YKK6 2376 aaKnown RBP12.35□□□□□ -0.43
VRK3-205ENST00000593919 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 TRIM64A6NGJ6 449 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 OR10H2O60403 315 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 NME6O75414 186 aaPredicted RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 CT62P0C5K7 136 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 MATN1P21941 496 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ESRRGP62508 458 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 CDK6Q00534 326 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 KCNAB2Q13303 367 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 LAPTM4AQ15012 233 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ZNF630Q2M218 657 aaPredicted RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 TTC23Q5W5X9 447 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 DGAT2L6Q6ZPD8 337 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 HIPK1Q86Z02 1210 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ZC3H7AQ8IWR0 971 aaKnown RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 C8orf59Q8N0T1 100 aaPredicted RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 BMPERQ8N8U9 685 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ZNF675Q8TD23 568 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 GIMAP5Q96F15 307 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 TPD52L3Q96J77 140 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 CTRCQ99895 268 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 ASPSCR1Q9BZE9 553 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 MAT2BQ9NZL9 334 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 PTGFRNQ9P2B2 879 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 GCM2O75603 506 aaPredicted RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 FABP3P05413 133 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 OR12D1P0DN82 309 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 HOXB6P17509 224 aaKnown RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 EEF1B2P24534 225 aaKnown RBP12.34□□□□□ -0.43
VRK3-205ENST00000593919 CCKBRP32239 447 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 NBL1P41271 181 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 KHKP50053 298 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 CRYBA2P53672 197 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 MGAT2Q10469 447 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 EPS8Q12929 822 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 IL11RAQ14626 422 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 VWA2Q5GFL6 755 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 FHL5Q5TD97 284 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 OR2T5Q6IEZ7 315 aa12.34□□□□□ -0.43
VRK3-205ENST00000593919 CBLL1Q75N03 491 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms