RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 NCBP2P52298 156 aaKnown RBP eCLIP16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 ART3Q13508 389 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 XKR7Q5GH72 579 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 TBCELQ5QJ74 424 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 DDIASQ8IXT1 998 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 GFM2Q969S9 779 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 OMA1Q96E52 524 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 C3orf30Q96M34 536 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 RILPQ96NA2 401 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 AMDHD1Q96NU7 426 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 CCT7Q99832 543 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 ADGRG4Q8IZF6 3080 aa16.95■□□□□ 0.3
SHKBP1-202ENST00000593764 FREM3P0C091 2139 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 A0A087WV62 115 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NPIPA2E9PIF3 369 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NPIPA3F8WFD2 350 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 PLOD2O00469 737 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 ITM2AO43736 263 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 SUSD5O60279 629 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 UGT2B11O75310 529 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 DCTP40126 519 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 CORO7P57737 925 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 RPL38P63173 70 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 CDSNQ15517 529 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 GALNTL6Q49A17 601 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 GXYLT1Q4G148 440 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF385BQ569K4 471 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF787Q6DD87 383 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 TMEM81Q6P7N7 255 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 XKRXQ6PP77 449 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NPSR1Q6W5P4 371 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NUP54Q7Z3B4 507 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 PHF10Q8WUB8 498 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 PGM2Q96G03 612 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF764Q96H86 408 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 JSRP1Q96MG2 331 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 TSSK3Q96PN8 268 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NODALQ96S42 347 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 STMN4Q9H169 189 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 CENPHQ9H3R5 247 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 FOLH1BQ9HBA9 442 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 GIMAP2Q9UG22 337 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 C19orf53Q9UNZ5 99 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 TMED5Q9Y3A6 229 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 NOTCH2Q04721 2471 aa16.94■□□□□ 0.3
SHKBP1-202ENST00000593764 WDR91A4D1P6 747 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 OR14I1A6ND48 311 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 UPK1AO00322 258 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 AQP7O14520 342 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TM9SF1O15321 606 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 BIRC5O15392 142 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TBX19O60806 448 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ERN1O75460 977 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 SNX4O95219 450 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 PSMG1O95456 288 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 BCKDHAP12694 445 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 AGAP20933 346 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ENDOUP21128 410 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 PTGDSP41222 190 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 MC3RP41968 323 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 PLCXD2Q0VAA5 305 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 PDE7AQ13946 482 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TMEM198Q66K66 360 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ANKRD26P1Q6NSI1 321 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TMEM107Q6UX40 140 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 SLC34A3Q8N130 599 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 OR2L13Q8N349 312 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 MARVELD2Q8N4S9 558 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 CLHC1Q8NHS4 586 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TMBIM1Q969X1 311 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ELP4Q96EB1 424 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF597Q96LX8 424 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 UBQLN3Q9H347 655 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 REEP4Q9H6H4 257 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF395Q9H8N7 513 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ACKR4Q9NPB9 350 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 QPCTLQ9NXS2 382 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TAS2R9Q9NYW1 312 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 TNFRSF10DQ9UBN6 386 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 ACTL7BQ9Y614 415 aa16.93■□□□□ 0.3
SHKBP1-202ENST00000593764 CACNA1DQ01668 2161 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 ITPR2Q14571 2701 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 TRGV5A0A0B4J1U4 118 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 AKAP10O43572 662 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 HCN1O60741 890 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 PEX11AO75192 247 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 LYPLA1O75608 230 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 SLITRK5O94991 958 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 NTSP30990 170 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 SMSP52788 366 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 RPP38P78345 283 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 PSG6Q00889 435 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 CHI3L2Q15782 390 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 ZNF551Q7Z340 670 aaPredicted RBP16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 CROCCP2Q86T23 111 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 PACS2Q86VP3 889 aa16.92■□□□□ 0.3
SHKBP1-202ENST00000593764 RPRMLQ8N4K4 120 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms