RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 TAS2R7Q9NYW3 318 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 SLC17A7Q9P2U7 560 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 PTGDR2Q9Y5Y4 395 aa13.99□□□□□ -0.17
TRIM28-203ENST00000593582 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
TRIM28-203ENST00000593582 PCNX1Q96RV3 2341 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 ZNF407Q9C0G0 2248 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 MYO1GB0I1T2 1018 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 NPIPB8E9PQR5 432 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 ERN1O75460 977 aaKnown RBP13.98□□□□□ -0.17
TRIM28-203ENST00000593582 SLITRK5O94991 958 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 JUNP05412 331 aaKnown RBP13.98□□□□□ -0.17
TRIM28-203ENST00000593582 HOXD4P09016 255 aaPredicted RBP13.98□□□□□ -0.17
TRIM28-203ENST00000593582 ENDOUP21128 410 aaKnown RBP13.98□□□□□ -0.17
TRIM28-203ENST00000593582 ELAVL4P26378 380 aaKnown RBP13.98□□□□□ -0.17
TRIM28-203ENST00000593582 CHRNB4P30926 498 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 NTSP30990 170 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 KRT20P35900 424 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TRPC1P48995 793 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 SNTA1Q13424 505 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 KIAA0040Q15053 153 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 KANK2Q63ZY3 851 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 SLC30A6Q6NXT4 461 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TMEM81Q6P7N7 255 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 B3GNT6Q6ZMB0 384 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 RNF165Q6ZSG1 346 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 MCEMP1Q8IX19 187 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 RPRMLQ8N4K4 120 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 MREGQ8N565 214 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 OR7G2Q8NG99 324 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 HGDQ93099 445 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TMBIM1Q969X1 311 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TMCO6Q96DC7 493 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TMEM41AQ96HV5 264 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 VSTM2LQ96N03 204 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 COL21A1Q96P44 957 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 MECRQ9BV79 373 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 TMEM109Q9BVC6 243 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 PARD6BQ9BYG5 372 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 SLC6A15Q9H2J7 730 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 KLRF1Q9NZS2 232 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 SPRR3Q9UBC9 169 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 C15orf41Q9Y2V0 281 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 DNAJC15Q9Y5T4 150 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 EML6Q6ZMW3 1958 aa13.98□□□□□ -0.17
TRIM28-203ENST00000593582 A0A087WV62 115 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 C15orf38-AP3S2A0A0A6YYH1 394 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 OR6C70A6NIJ9 312 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 ABCB7O75027 752 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 COQ9O75208 318 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 UGT2B11O75310 529 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 REM1O75628 298 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CHRNGP07510 517 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 SNRPB2P08579 225 aaKnown RBP13.97□□□□□ -0.17
TRIM28-203ENST00000593582 FGF4P08620 206 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 LINC00032P0C843 101 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CT45A8P0DMV1 189 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CT45A9P0DMV2 189 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 GABRA1P14867 456 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 PTGER4P35408 488 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 SERPINB5P36952 375 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CDK9P50750 372 aaKnown RBP13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CORO7P57737 925 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 NUP107P57740 925 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 TOMM20Q15388 145 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 KRT71Q3SY84 523 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CT45A2Q5DJT8 189 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 ARL13AQ5H913 290 aaPredicted RBP13.97□□□□□ -0.17
TRIM28-203ENST00000593582 FNDC7Q5VTL7 733 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 Q6ZSR9 355 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 DDIASQ8IXT1 998 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CLYBLQ8N0X4 340 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 OR10Q1Q8NGQ4 319 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 OR1J4Q8NGS1 313 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 CCT7Q99832 543 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 TTYH2Q9BSA4 534 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 OSBPL11Q9BXB4 747 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 UBQLN3Q9H347 655 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 GLIPR2Q9H4G4 154 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 FOLH1BQ9HBA9 442 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 RNF6Q9Y252 685 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 TMED5Q9Y3A6 229 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 TRAF6Q9Y4K3 522 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 PCDHGB3Q9Y5G1 929 aa13.97□□□□□ -0.17
TRIM28-203ENST00000593582 PRAMEF25A6NGN4 478 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 C19orf84I3L1E1 186 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 PLOD2O00469 737 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 GNB5O14775 395 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 ICOSLGO75144 302 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 NME6O75414 186 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-203ENST00000593582 HPNP05981 417 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 GLI4P10075 376 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 PRF1P14222 555 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 TACR1P25103 407 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 IL12BP29460 328 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 MC3RP41968 323 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 ZNF155Q12901 538 aaPredicted RBP13.96□□□□□ -0.17
TRIM28-203ENST00000593582 PRSS53Q2L4Q9 553 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 SH2D4BQ5SQS7 431 aa13.96□□□□□ -0.17
TRIM28-203ENST00000593582 C1orf185Q5T7R7 199 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms