RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 FAM76AQ8TAV0 307 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 ASB5Q8WWX0 329 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 ERP27Q96DN0 273 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 TMEM41AQ96HV5 264 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 GNRHR2Q96P88 292 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 FAM111AQ96PZ2 611 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 BBS4Q96RK4 519 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 TTYH2Q9BSA4 534 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 UCK2Q9BZX2 261 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
APOC1-208ENST00000592535 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 METTL7AQ9H8H3 244 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 MIEF1Q9NQG6 463 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 ALKBH4Q9NXW9 302 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 SENP1Q9P0U3 644 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 SLC17A7Q9P2U7 560 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.38
APOC1-208ENST00000592535 LGALS13Q9UHV8 139 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 EXO1Q9UQ84 846 aaKnown RBP12.7□□□□□ -0.38
APOC1-208ENST00000592535 C15orf41Q9Y2V0 281 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
APOC1-208ENST00000592535 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
APOC1-208ENST00000592535 NKX2-6A6NCS4 301 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 C2orf72A6NCS6 295 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 SLC28A1O00337 649 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 AZIN1O14977 448 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 PLOD3O60568 738 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 WDR1O75083 606 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 SEC22BO75396 215 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 TRAPPC6AO75865 159 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
APOC1-208ENST00000592535 JUNP05412 331 aaKnown RBP12.69□□□□□ -0.38
APOC1-208ENST00000592535 HPNP05981 417 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 GLI4P10075 376 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 PRPH2P23942 346 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 MPIP34949 423 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 CDK9P50750 372 aaKnown RBP12.69□□□□□ -0.38
APOC1-208ENST00000592535 CORO7P57737 925 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 KIAA0040Q15053 153 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 ERCC6LQ2NKX8 1250 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 WDR93Q6P2C0 686 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 TMEM81Q6P7N7 255 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 EMBQ6PCB8 327 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 NPSR1Q6W5P4 371 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 OR2T11Q8NH01 316 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 LILRB4Q8NHJ6 448 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 TMBIM1Q969X1 311 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 EGLN2Q96KS0 407 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 VSTM2LQ96N03 204 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 BTBD9Q96Q07 612 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 MECRQ9BV79 373 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 TRIM8Q9BZR9 551 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 FOLH1BQ9HBA9 442 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 GALNT9Q9HCQ5 603 aa12.69□□□□□ -0.38
APOC1-208ENST00000592535 INTS1Q8N201 2190 aaKnown RBP12.69□□□□□ -0.38
APOC1-208ENST00000592535 C15orf38-AP3S2A0A0A6YYH1 394 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 NPIPB8E9PQR5 432 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 RGS14O43566 566 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 ICOSLGO75144 302 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 ERN1O75460 977 aaKnown RBP12.68□□□□□ -0.38
APOC1-208ENST00000592535 REM1O75628 298 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 CHRNGP07510 517 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 CT45A8P0DMV1 189 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 CT45A9P0DMV2 189 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TACR1P25103 407 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 PTPN6P29350 595 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 MC3RP41968 323 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 NCBP2P52298 156 aaKnown RBP eCLIP12.68□□□□□ -0.38
APOC1-208ENST00000592535 CRYZQ08257 329 aaKnown RBP12.68□□□□□ -0.38
APOC1-208ENST00000592535 CT45A2Q5DJT8 189 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 KANK2Q63ZY3 851 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TIGD3Q6B0B8 471 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 SLC30A6Q6NXT4 461 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 Q6ZSR9 355 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 IKBIPQ70UQ0 350 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 GDF7Q7Z4P5 450 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 ZNF295-AS1Q8N0V1 137 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 OR10Q1Q8NGQ4 319 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TCP10LQ8TDR4 215 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 CAVIN3Q969G5 261 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 COL21A1Q96P44 957 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TRMOQ9BU70 441 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 ROPN1BQ9BZX4 212 aaPredicted RBP12.68□□□□□ -0.38
APOC1-208ENST00000592535 ENKD1Q9H0I2 346 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TUBB1Q9H4B7 451 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 GLIPR2Q9H4G4 154 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 ROPN1Q9HAT0 212 aaPredicted RBP12.68□□□□□ -0.38
APOC1-208ENST00000592535 LRTM1Q9HBL6 345 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 C1orf109Q9NX04 203 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 TAS2R7Q9NYW3 318 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 KLRF1Q9NZS2 232 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 WBP11Q9Y2W2 641 aaKnown RBP12.68□□□□□ -0.38
APOC1-208ENST00000592535 SLC6A5Q9Y345 797 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 MED12Q93074 2177 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 KIAA1549Q9HCM3 1950 aa12.68□□□□□ -0.38
APOC1-208ENST00000592535 A0A0G2JNJ9 132 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 PRAMEF25A6NGN4 478 aa12.67□□□□□ -0.38
APOC1-208ENST00000592535 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms