RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 UBAP2Q5T6F2 1119 aaKnown RBP17.2■□□□□ 0.34
CCDC43-205ENST00000592333 FAM111BQ6SJ93 734 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 ANGPTL8Q6UXH0 198 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 SLC22A9Q8IVM8 553 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 PRR22Q8IZ63 422 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 C1orf52Q8N6N3 182 aaKnown RBP17.2■□□□□ 0.34
CCDC43-205ENST00000592333 FAM83FQ8NEG4 500 aaPredicted RBP17.2■□□□□ 0.34
CCDC43-205ENST00000592333 IFT81Q8WYA0 676 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 SLC35A4Q96G79 324 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 BTBD9Q96Q07 612 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 OR2B2Q9GZK3 357 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 ACBD3Q9H3P7 528 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 SIRT5Q9NXA8 310 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 EHD3Q9NZN3 535 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 ST6GALNAC2Q9UJ37 374 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 UTS2RQ9UKP6 389 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 PLLPQ9Y342 182 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 SLC6A5Q9Y345 797 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 MTORP42345 2549 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 FREM3P0C091 2139 aa17.2■□□□□ 0.34
CCDC43-205ENST00000592333 ITPR3Q14573 2671 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 MANBAO00462 879 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 PPP6CO00743 305 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 GNB5O14775 395 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 SUPT7LO94864 414 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 SLITRK5O94991 958 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 OR4F21O95013 312 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 ENO1P06733 434 aaKnown RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 CYP4B1P13584 511 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 IMPDH1P20839 514 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 CHMP24386 653 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 PTGDSP41222 190 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 NAA20P61599 178 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 TRMT12Q53H54 448 aaKnown RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 EIPR1Q53HC9 387 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 WIPI1Q5MNZ9 446 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 GALNT18Q6P9A2 607 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 CAMKMTQ7Z624 323 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 ADGRE4PQ86SQ3 457 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 OR52R1Q8NGF1 315 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 GOT1L1Q8NHS2 421 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 RMND5BQ96G75 393 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 COL21A1Q96P44 957 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 TRIB1Q96RU8 372 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 NODALQ96S42 347 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 TM9SF2Q99805 663 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 STMN4Q9H169 189 aaPredicted RBP17.19■□□□□ 0.34
CCDC43-205ENST00000592333 KLRF1Q9NZS2 232 aa17.19■□□□□ 0.34
CCDC43-205ENST00000592333 EXOC1LA0A1B0GW35 172 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 PRAMEF25A6NGN4 478 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 TUBAL3A6NHL2 446 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 UGT2B11O75310 529 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 CTAGE8P0CG41 777 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 EPXP11678 715 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 ATP5F1P24539 256 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 PKNOX1P55347 436 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 MRPS22P82650 360 aaKnown RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 EFR3AQ14156 821 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 EXOSC7Q15024 291 aaKnown RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 KRTAP21-3Q3LHN1 58 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 ZNF628Q5EBL2 1059 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 AAGABQ6PD74 315 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 GPRIN3Q6ZVF9 776 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 TRMT10CQ7L0Y3 403 aaKnown RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 PLCZ1Q86YW0 608 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 CTAGE4Q8IX94 777 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 ACMSDQ8TDX5 336 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 MBD6Q96DN6 1003 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 C11orf24Q96F05 449 aaPredicted RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 TMUB1Q9BVT8 246 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 SFXN3Q9BWM7 321 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 GIMAP4Q9NUV9 329 aa17.18■□□□□ 0.34
CCDC43-205ENST00000592333 WBP11Q9Y2W2 641 aaKnown RBP17.18■□□□□ 0.34
CCDC43-205ENST00000592333 H3BQF6 201 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 PLOD3O60568 738 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 RCBTB2O95199 551 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ESRRBO95718 433 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 GSTA1P08263 222 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 SRD5A2P31213 254 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 MPIP34949 423 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ALDH9A1P49189 494 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 PCYT1AP49585 367 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 PNLIPRP2P54317 469 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 PRKAA2P54646 552 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 HMGCS1Q01581 520 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ACSM2AQ08AH3 577 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 GAB1Q13480 694 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ERCC6LQ2NKX8 1250 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 UNC50Q53HI1 259 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ACSM2BQ68CK6 577 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 RPS27LQ71UM5 84 aaKnown RBP17.17■□□□□ 0.34
CCDC43-205ENST00000592333 CDYL2Q8N8U2 506 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 WDSUB1Q8N9V3 476 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 NOA1Q8NC60 698 aaKnown RBP17.17■□□□□ 0.34
CCDC43-205ENST00000592333 ADCY4Q8NFM4 1077 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 METTL6Q8TCB7 284 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 RNF138Q8WVD3 245 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 WNT2BQ93097 391 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 L3HYPDHQ96EM0 354 aa17.17■□□□□ 0.34
CCDC43-205ENST00000592333 C16orf45Q96MC5 204 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms