RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	DMD	P11532	3685 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CLDN24	A6NM45	220 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	SLC1A7	O00341	560 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	HR	O43593	1189 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	TPPP	O94811	219 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	UBL4A	P11441	157 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	IFNA8	P32881	189 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	KDELR2	P33947	212 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	PCGF2	P35227	344 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CHI3L1	P36222	383 aa	Predicted RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	DDOST	P39656	456 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	LIM2	P55344	173 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	VSX2	P58304	361 aa	Predicted RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CXCR4	P61073	352 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	MRPS15	P82914	257 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	FAM98B	Q52LJ0	330 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ANGPTL8	Q6UXH0	198 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	FAM92B	Q6ZTR7	304 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ABHD13	Q7L211	337 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZDHHC13	Q8IUH4	622 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	DNAJC22	Q8N4W6	341 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318		Q8N9G6	341 aa	Predicted RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	MCFD2	Q8NI22	146 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	FAR1	Q8WVX9	515 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZNF681	Q96N22	645 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	RBM4B	Q9BQ04	359 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	RBM4	Q9BWF3	364 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	UGT2B28	Q9BY64	529 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	RAB33B	Q9H082	229 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ABCB10	Q9NRK6	738 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	LRIT1	Q9P2V4	623 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	DAPP1	Q9UN19	280 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	TPRKB	Q9Y3C4	175 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	MAP4K5	Q9Y4K4	846 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	SNX8	Q9Y5X2	465 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	PMF1-BGLAP	U3KQ54	211 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	AGAP5	A6NIR3	686 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ERAL1	O75616	437 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	INMT	O95050	263 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	NR2F6	P10588	404 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	GABRA4	P48169	554 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	NKX2-5	P52952	324 aa	Predicted RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	EPHA4	P54764	986 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	TNFRSF17	Q02223	184 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	PRKCD	Q05655	676 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CHRNB3	Q05901	458 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZFP69	Q49AA0	526 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZC3H12B	Q5HYM0	836 aa	Known RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CCDC81	Q6ZN84	652 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	KANSL1	Q7Z3B3	1105 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	EID3	Q8N140	333 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	TMEM105	Q8N8V8	129 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	C11orf65	Q8NCR3	313 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	OR6F1	Q8NGZ6	308 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	NDNF	Q8TB73	568 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	FBLIM1	Q8WUP2	373 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	SLC47A1	Q96FL8	570 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	BTBD2	Q9BX70	525 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	NLN	Q9BYT8	704 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	TMEM38A	Q9H6F2	299 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	SOX17	Q9H6I2	414 aa	Predicted RBP	14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	C12orf10	Q9HB07	376 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	CCNB1IP1	Q9NPC3	277 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	STARD5	Q9NSY2	213 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	EPHA6	Q9UF33	1036 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	PCDHGA8	Q9Y5G5	932 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	MAU2	Q9Y6X3	613 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	HSPE1-MOB4	S4R3N1	261 aa		14.47	□□□□□ -0.09
DDX39A-209	ENST00000589318	ADAMTS9	Q9P2N4	1935 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	RP1	P56715	2156 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	PNMA8C	A0A1B0GUJ8	204 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	RHPN2P1	A8MT19	583 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	TMEM229A	B2RXF0	380 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	UPK1A	O00322	258 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	NUDT21	O43809	227 aa	Known RBP	14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	B3GALT2	O43825	422 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	ICMT	O60725	284 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	GNS	P15586	552 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	SLC13A2	Q13183	592 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	PRTG	Q2VWP7	1150 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZNF404	Q494X3	552 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	NKAIN2	Q5VXU1	208 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	STEAP3	Q658P3	488 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	SNX29P2	Q8IUI4	249 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	MCAT	Q8IVS2	390 aa	Known RBP	14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	ZNF655	Q8N720	491 aa	Predicted RBP	14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	SETD9	Q8NE22	299 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	OR10Q1	Q8NGQ4	319 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	PYURF	Q96I23	114 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	TOR3A	Q9H497	397 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	MAGIX	Q9H6Y5	334 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	NTN4	Q9HB63	628 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	POLE4	Q9NR33	117 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	PHF11	Q9UIL8	331 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	C3orf18	Q9UK00	162 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	MKLN1	Q9UL63	735 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	SLC22A7	Q9Y694	548 aa		14.46	□□□□□ -0.09
DDX39A-209	ENST00000589318	IGHV5-51	A0A0C4DH38	117 aa		14.45	□□□□□ -0.1
DDX39A-209	ENST00000589318	TLCD2	A6NGC4	264 aa		14.45	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZNF860	A6NHJ4	632 aa		14.45	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms