RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 DNTTP04053 509 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SCG5P05408 212 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 ACADMP11310 421 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PKLRP30613 574 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 BUD31P41223 144 aaPredicted RBP6.97□□□□□ -1.29
ZNF540-206ENST00000589117 TNFRSF4P43489 277 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 RUNX1T1Q06455 604 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SPHARQ15513 63 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 DUSP6Q16828 381 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 ITPRIPL2Q3MIP1 535 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 GPAT3Q53EU6 434 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SLC25A30Q5SVS4 291 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 CDCP2Q5VXM1 449 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 TANGO2Q6ICL3 276 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 MTSS1LQ765P7 747 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SLC34A3Q8N130 599 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 ACOT4Q8N9L9 421 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PROKR2Q8NFJ6 384 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 GPR32P1Q8NGA4 272 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SLC7A13Q8TCU3 470 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PIK3R3Q92569 461 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 SARGQ9BW04 601 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PINK1Q9BXM7 581 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 ABCG4Q9H172 646 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 LHX9Q9NQ69 397 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 MBNL1Q9NR56 388 aaKnown RBP6.97□□□□□ -1.29
ZNF540-206ENST00000589117 LYARQ9NX58 379 aaKnown RBP6.97□□□□□ -1.29
ZNF540-206ENST00000589117 FBXL12Q9NXK8 326 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 OR6C2Q9NZP2 312 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 C5AR2Q9P296 337 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PMF1-BGLAPU3KQ54 211 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 PTPRSQ13332 1948 aa6.97□□□□□ -1.29
ZNF540-206ENST00000589117 KRBA1A5PL33 1030 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 URADA6NGE7 173 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SYT5O00445 386 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 MYL12BO14950 172 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 EMC8O43402 210 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ASNA1O43681 348 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ENTPD6O75354 484 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SNX4O95219 450 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 LGI1O95970 557 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 MYL12AP19105 171 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 TNNI3P19429 210 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ZNF10P21506 573 aaPredicted RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 CD72P21854 359 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ATP5A1P25705 553 aaKnown RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SLC15A1P46059 708 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 RGS1Q08116 209 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ENPP2Q13822 863 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 LRRC32Q14392 662 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ZIC1Q15915 447 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SYPL1Q16563 259 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 TMEM44Q2T9K0 475 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 C12orf73Q69YU5 71 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 PGBD2Q6P3X8 592 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 UBE3DQ7Z6J8 389 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 CYP4Z2PQ8N1L4 340 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 ZBTB8BQ8NAP8 495 aaPredicted RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 OR2L3Q8NG85 312 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 OR14C36Q8NHC7 312 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 MS4A6EQ96DS6 147 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 PRRC1Q96M27 445 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SLC38A2Q96QD8 506 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 POLDIP3Q9BY77 421 aaKnown RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 NXF2Q9GZY0 626 aaKnown RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 LMAN2LQ9H0V9 348 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SLC25A19Q9HC21 320 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 FZD3Q9NPG1 666 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 KRCC1Q9NPI7 259 aaPredicted RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SCML1Q9UN30 329 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SSR3Q9UNL2 185 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 KCNK6Q9Y257 313 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 SLC17A4Q9Y2C5 497 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 WDR37Q9Y2I8 494 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 PCDHGA3Q9Y5H0 932 aa6.96□□□□□ -1.29
ZNF540-206ENST00000589117 PCYT1BQ9Y5K3 369 aaPredicted RBP6.96□□□□□ -1.29
ZNF540-206ENST00000589117 TBC1D3DA0A087WVF3 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3IA0A087WXS9 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3EA0A087X179 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3KA0A087X1G2 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3FA6NER0 549 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ISM1B1AKI9 464 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3LB9A6J9 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 AXIN1O15169 862 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 KIAA0513O60268 411 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 AVPP01185 164 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 HMGN2P05204 90 aaKnown RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 CEACAM5P06731 702 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 CA3P07451 260 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TBC1D3HP0C7X1 549 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TGM1P22735 817 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 MAOBP27338 520 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TLX1P31314 330 aaPredicted RBP6.96□□□□□ -1.3
ZNF540-206ENST00000589117 WASP42768 502 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 PCYT1AP49585 367 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 TAS2R41P59536 307 aa6.96□□□□□ -1.3
ZNF540-206ENST00000589117 ERVK-21P61565 698 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms