RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 GGTA1PQ4G0N0 100 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 CCDC25Q86WR0 208 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 TRIM42Q8IWZ5 723 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 PTGR2Q8N8N7 351 aaPredicted RBP16.71■□□□□ 0.27
CCDC43-204ENST00000588687 INTS12Q96CB8 462 aaKnown RBP16.71■□□□□ 0.27
CCDC43-204ENST00000588687 ZNF681Q96N22 645 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 KLRF1Q9NZS2 232 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 FBXL2Q9UKC9 423 aa16.71■□□□□ 0.27
CCDC43-204ENST00000588687 C1orf226A1L170 272 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 FRG2CA6NGY1 282 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 DEFB108AA8MXU0 73 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 CBR3O75828 277 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF708P17019 499 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 FEN1P39748 380 aaKnown RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 MAGEA12P43365 314 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 MAPK12P53778 367 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 HMGCS1Q01581 520 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 TRMT12Q53H54 448 aaKnown RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 CCNYL2Q5T2Q4 361 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 C10orf62Q5T681 223 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 C6orf163Q5TEZ5 329 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 SHEQ5VZ18 495 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 CLEC9AQ6UXN8 241 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 IFNEQ86WN2 208 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 ADCY4Q8NFM4 1077 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 OR52R1Q8NGF1 315 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 OR14L1PQ8NHC6 308 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 TRPC4APQ8TEL6 797 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 CNRIP1Q96F85 164 aaPredicted RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 BRINP2Q9C0B6 783 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 PIGMQ9H3S5 423 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 FARSBQ9NSD9 589 aaKnown RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 PACSIN3Q9UKS6 424 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 CFL2Q9Y281 166 aa16.7■□□□□ 0.26
CCDC43-204ENST00000588687 FBN1P35555 2871 aaKnown RBP16.7■□□□□ 0.26
CCDC43-204ENST00000588687 A0A1W2PNV4 684 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 OR6C70A6NIJ9 312 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 C17orf51A8MQB3 221 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 STX16-NPEPL1H3BU86 382 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 PLOD2O00469 737 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 STX16O14662 325 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 TGM6O95932 706 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CTAGE8P0CG41 777 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 PCSK2P16519 638 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 DRD5P21918 477 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 ADSLP30566 484 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-204ENST00000588687 SRD5A2P31213 254 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 PPICP45877 212 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CPA2P48052 419 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 PCYT1AP49585 367 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 STARP49675 285 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 SERPINB8P50452 374 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CCNG1P51959 295 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 MRPS35P82673 323 aaKnown RBP16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CAV1Q03135 178 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 SRYQ05066 204 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 FAM180BQ6P0A1 224 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 ENPP6Q6UWR7 440 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 PAGE2Q7Z2X7 111 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CTAGE4Q8IX94 777 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CIARTQ8N365 385 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-204ENST00000588687 RDH11Q8TC12 318 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 TM4SF18Q96CE8 201 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 SLC35A4Q96G79 324 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 BTBD9Q96Q07 612 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 LRRC1Q9BTT6 524 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 TAS2R10Q9NYW0 307 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 BCAP29Q9UHQ4 241 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 GPR55Q9Y2T6 319 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-204ENST00000588687 WIF1Q9Y5W5 379 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 CSPG4Q6UVK1 2322 aa16.69■□□□□ 0.26
CCDC43-204ENST00000588687 GOLGA6L10A6NI86 522 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 RPS17P08708 135 aaKnown RBP16.68■□□□□ 0.26
CCDC43-204ENST00000588687 CSNK2A2P19784 350 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-204ENST00000588687 CHMP24386 653 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 GAS1P54826 345 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 B3GALT5-AS1P59052 145 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF628Q5EBL2 1059 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 Q5PR19 223 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 LETMD1Q6P1Q0 360 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 RPS27LQ71UM5 84 aaKnown RBP16.68■□□□□ 0.26
CCDC43-204ENST00000588687 PRIMA1Q86XR5 153 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 PLCZ1Q86YW0 608 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 LRRC75A-AS1Q8N1F1 130 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 OR4F6Q8NGB9 312 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF675Q8TD23 568 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 TMBIM1Q969X1 311 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 PHF21BQ96EK2 531 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 MARK4Q96L34 752 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 PIP5K1AQ99755 562 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 ZNF225Q9UK10 706 aa16.68■□□□□ 0.26
CCDC43-204ENST00000588687 PPP6CO00743 305 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 MSTNO14793 375 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 CTIFO43310 598 aaKnown RBP16.67■□□□□ 0.26
CCDC43-204ENST00000588687 TSPAN2O60636 221 aa16.67■□□□□ 0.26
CCDC43-204ENST00000588687 NME6O75414 186 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-204ENST00000588687 ERAL1O75616 437 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms