RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 NFAM1Q8NET5 270 aaPredicted RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 NLGN4YQ8NFZ3 816 aaPredicted RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 OR7G1Q8NGA0 311 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 OR2Y1Q8NGV0 311 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 C16orf52Q8NHV5 167 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 SLC26A7Q8TE54 656 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 ADAMTS15Q8TE58 950 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 METTL21AQ8WXB1 218 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 PIK3R3Q92569 461 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 DAZLQ92904 295 aaKnown RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 FAM162AQ96A26 154 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 TMEM19Q96HH6 336 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 LRGUKQ96M69 825 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 VSTM2LQ96N03 204 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 LMF2Q9BU23 707 aaKnown RBP10.51□□□□□ -0.73
VMP1-207ENST00000588131 ITPAQ9BY32 194 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 TRIM15Q9C019 465 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 PIGUQ9H490 435 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 RUBCNLQ9H714 662 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 GORASP2Q9H8Y8 452 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 ASCL3Q9NQ33 180 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 P2RX2Q9UBL9 471 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 BOLA1Q9Y3E2 137 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 WDR87Q6ZQQ6 2873 aa10.51□□□□□ -0.73
VMP1-207ENST00000588131 LOC102723996A0A087X1L8 192 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 LOC101059948A0A1B0GTJ6 334 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 TCRBV3S1A0A5B6 114 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 GXYLT2A0PJZ3 443 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 SYNDIG1LA6NDD5 238 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 AQP12BA6NM10 295 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 DYRK3O43781 588 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 SLC28A2O43868 658 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 PRKNO60260 465 aaPredicted RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 MGRN1O60291 552 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 SEC24DO94855 1032 aaPredicted RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 NKX2-2O95096 273 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 SERPINA1P01009 418 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 C8BP07358 591 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 CHRM4P08173 479 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ALOX5P09917 674 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 F8A1P23610 371 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 RBMS1P29558 406 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 KDELR2P33947 212 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 DLSTP36957 453 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ANXA11P50995 505 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 GPR143P51810 404 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 CRYBA2P53672 197 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 PCBP3P57721 371 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 MRPS22P82650 360 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 TXNL4AP83876 142 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 PSG6Q00889 435 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 CAMK2BQ13554 666 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 DNASE1L3Q13609 305 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 PCOLCEQ15113 449 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 LRRC23Q53EV4 343 aaPredicted RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 HEPHL1Q6MZM0 1159 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ZCCHC12Q6PEW1 402 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 PAPD4Q6PIY7 484 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 RNF111Q6ZNA4 994 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 AQP12AQ8IXF9 295 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 FAM86B1Q8N7N1 296 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 MORN4Q8NDC4 146 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 FAM110BQ8TC76 370 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 PYDC1Q8WXC3 89 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ART5Q96L15 291 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 STACQ99469 402 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 THUMPD1Q9NXG2 353 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 GIN1Q9NXP7 522 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 C19orf25Q9UFG5 118 aaPredicted RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 ZNF223Q9UK11 482 aaPredicted RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 TCFL5Q9UL49 500 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ANGPT4Q9Y264 503 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 FARSAQ9Y285 508 aaKnown RBP10.5□□□□□ -0.73
VMP1-207ENST00000588131 PADI2Q9Y2J8 665 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 HS3ST3B1Q9Y662 390 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 V9GYQ6 96 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 ZNF292O60281 2723 aa10.5□□□□□ -0.73
VMP1-207ENST00000588131 GVINP1Q7Z2Y8 2422 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 PCSK5Q92824 1860 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 DUXAA6NLW8 204 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 A8MVJ9 347 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.49□□□□□ -0.73
VMP1-207ENST00000588131 C5orf58C9J3I9 102 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 H3BNX3 289 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 STMND1H3BQB6 276 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 SOCS6O14544 535 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 GMNNO75496 209 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 PGM3O95394 542 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 ZIC2O95409 532 aaPredicted RBP10.49□□□□□ -0.73
VMP1-207ENST00000588131 OPN1SWP03999 348 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 CD63P08962 238 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 NR2F1P10589 423 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 GABRA3P34903 492 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 RHDQ02161 417 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 NNATQ16517 81 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 GPAT3Q53EU6 434 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 CCNJQ5T5M9 372 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 FBXW10Q5XX13 1052 aa10.49□□□□□ -0.73
VMP1-207ENST00000588131 REEP3Q6NUK4 255 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms