RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CXorf40AQ8TE69 158 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 SMG7Q92540 1137 aaKnown RBP17.5■□□□□ 0.39
DDX39A-206ENST00000587730 GDF15Q99988 308 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 TMEM246Q9BRR3 403 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 NDEL1Q9GZM8 345 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 SAP130Q9H0E3 1048 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 NIPAL2Q9H841 368 aa17.5■□□□□ 0.39
DDX39A-206ENST00000587730 KRCC1Q9NPI7 259 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-206ENST00000587730 GSAPA4D1B5 854 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TFECO14948 347 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 ARHGEF9O43307 516 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 OR1F1O43749 312 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 SLC2A2P11168 524 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 NCBP2P52298 156 aaKnown RBP eCLIP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TAS2R41P59536 307 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 RPS25P62851 125 aaKnown RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 BDH1Q02338 343 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 SLC9A5Q14940 896 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 CLPPQ16740 277 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 C6orf183Q5T699 404 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 NDUFAF5Q5TEU4 345 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 METRNLQ641Q3 311 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 CELF5Q8N6W0 485 aaKnown RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 OR6T1Q8NGN1 323 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 ARRDC3Q96B67 414 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 RNF170Q96K19 258 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 DPH7Q9BTV6 452 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TMEM106CQ9BVX2 250 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 RSPO3Q9BXY4 272 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 ABCG4Q9H172 646 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 KLHL28Q9NXS3 571 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 ACSL5Q9ULC5 683 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 LTBP2Q14767 1821 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 AP3D1O14617 1153 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 CASKO14936 926 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 BUD31P41223 144 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TSFMP43897 325 aaKnown RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 SLAMF1Q13291 335 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 SZRD1Q7Z422 152 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 WDR53Q7Z5U6 358 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 BCDIN3DQ7Z5W3 292 aaKnown RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 KLHL36Q8N4N3 616 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 C17orf50Q8WW18 174 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TMEM203Q969S6 136 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 ARHGDIGQ99819 225 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 MMP28Q9H239 520 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 MARCH7Q9H992 704 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 CUEDC1Q9NWM3 386 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-206ENST00000587730 PLAGL1Q9UM63 463 aa17.49■□□□□ 0.39
DDX39A-206ENST00000587730 PRAMEF27A3QJZ7 478 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 FAM170BA6NMN3 283 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 H7BY64 318 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 SGK494L7N484 410 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 MAN2B1O00754 1011 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 HMGN1P05114 100 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 HNRNPA1P09651 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 FPR3P25089 353 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 SLC1A3P43003 542 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 MAN2A2P49641 1150 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 SF3A2Q15428 464 aaKnown RBP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 GPR19Q15760 415 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 FNDC3BQ53EP0 1204 aaKnown RBP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 YIF1BQ5BJH7 314 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 C9orf64Q5T6V5 341 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 UBE3DQ7Z6J8 389 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 PLCZ1Q86YW0 608 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 Q8N402 240 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 LMNTD1Q8N9Z9 388 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 SRFBP1Q8NEF9 429 aaKnown RBP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 OR52P1PQ8NH57 321 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 GATAD2BQ8WXI9 593 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 TM9SF4Q92544 642 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 VWCEQ96DN2 955 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 PRAP1Q96NZ9 151 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 PPP1R3EQ9H7J1 279 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 GIMAP4Q9NUV9 329 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 PAQR5Q9NXK6 330 aaPredicted RBP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 CLCA2Q9UQC9 943 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 ENTPD4Q9Y227 616 aa17.48■□□□□ 0.39
DDX39A-206ENST00000587730 EXOGQ9Y2C4 368 aaKnown RBP17.48■□□□□ 0.39
DDX39A-206ENST00000587730 C1QTNF3-AMACRE9PGA6 284 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 ALX3O95076 343 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 LIMS3P0CW19 117 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 LIMS4P0CW20 117 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 WEE1P30291 646 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 CDH11P55287 796 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 ZNF697Q5TEC3 545 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 TYW3Q6IPR3 259 aaKnown RBP17.47■□□□□ 0.39
DDX39A-206ENST00000587730 FAM180BQ6P0A1 224 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 KIF18BQ86Y91 864 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 CAMKK1Q8N5S9 505 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 ZNF485Q8NCK3 441 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 SLC9A6Q92581 669 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 OTULINQ96BN8 352 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 MENTQ9BUN1 341 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 KCNN2Q9H2S1 579 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 ING3Q9NXR8 418 aa17.47■□□□□ 0.39
DDX39A-206ENST00000587730 A0A087WUU8 490 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms