RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 MAT2BQ9NZL9 334 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 PRODH2Q9UF12 536 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 PSME2Q9UL46 239 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 EIF3LQ9Y262 564 aaKnown RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
DNMT1-213ENST00000587604 DSCAMO60469 2012 aa12.77□□□□□ -0.37
DNMT1-213ENST00000587604 DNHD1Q96M86 4753 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 HIVEP2P31629 2446 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 PRAMEF25A6NGN4 478 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 OR6C70A6NIJ9 312 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 FAM171A2A8MVW0 826 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 TO15178 435 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 ERAL1O75616 437 aaKnown RBP12.76□□□□□ -0.37
DNMT1-213ENST00000587604 CNTFP26441 200 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 TYK2P29597 1187 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 SRD5A2P31213 254 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 FEN1P39748 380 aaKnown RBP12.76□□□□□ -0.37
DNMT1-213ENST00000587604 STARP49675 285 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 DIO3P55073 304 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 HMGCS1Q01581 520 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 IFT88Q13099 833 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 AAGABQ6PD74 315 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 PTGR2Q8N8N7 351 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-213ENST00000587604 SIMC1Q8NDZ2 872 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 RDH11Q8TC12 318 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 TMCO6Q96DC7 493 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 ARSGQ96EG1 525 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 LRRC1Q9BTT6 524 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 TAS2R10Q9NYW0 307 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 CLCF1Q9UBD9 225 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 PACSIN3Q9UKS6 424 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 PLLPQ9Y342 182 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 MRPS18CQ9Y3D5 142 aaKnown RBP12.76□□□□□ -0.37
DNMT1-213ENST00000587604 HEATR5AQ86XA9 2040 aa12.76□□□□□ -0.37
DNMT1-213ENST00000587604 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 A0A1B0GTL3 188 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 STX16-NPEPL1H3BU86 382 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 STX16O14662 325 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 MSTNO14793 375 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TNFSF13O75888 250 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 CBX7O95931 251 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ALDOAP04075 364 aaKnown RBP12.75□□□□□ -0.37
DNMT1-213ENST00000587604 HEXAP06865 529 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PCYT1AP49585 367 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 EMDP50402 254 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 LHX2P50458 406 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TRAF3Q13114 568 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TRADDQ15628 312 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 GGTA1PQ4G0N0 100 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TRMT12Q53H54 448 aaKnown RBP12.75□□□□□ -0.37
DNMT1-213ENST00000587604 SGO1Q5FBB7 561 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TECRLQ5HYJ1 363 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PLXDC2Q6UX71 529 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ZDHHC24Q6UX98 284 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 COMMD6Q7Z4G1 85 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 MILR1Q7Z6M3 343 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PLCZ1Q86YW0 608 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 GRAMD2AQ8IUY3 354 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 GCNT2Q8N0V5 402 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 LRRC75A-AS1Q8N1F1 130 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ADCY4Q8NFM4 1077 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 OR52R1Q8NGF1 315 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TM4SF18Q96CE8 201 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 KLHL29Q96CT2 875 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 MRRFQ96E11 262 aaKnown RBP12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PHF21BQ96EK2 531 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 DTNBP1Q96EV8 351 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 COL21A1Q96P44 957 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PIP5K1AQ99755 562 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 RAB17Q9H0T7 212 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ELOVL6Q9H5J4 265 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-213ENST00000587604 ZBTB26Q9HCK0 441 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 EHD3Q9NZN3 535 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PCTPQ9UKL6 214 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TMCO1Q9UM00 188 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 SLC12A4Q9UP95 1085 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 DLGAP4Q9Y2H0 992 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 GPR55Q9Y2T6 319 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-213ENST00000587604 TESMINQ9Y4I5 508 aa12.75□□□□□ -0.37
DNMT1-213ENST00000587604 PCNX3Q9H6A9 2034 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 ZANQ9Y493 2812 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 FRG2CA6NGY1 282 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 PLOD2O00469 737 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 ABCB7O75027 752 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 CRHP06850 196 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 RBP1P09455 135 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF708P17019 499 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 SERPINB8P50452 374 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 CLDN18P56856 261 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 C2orf54Q08AI8 447 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 GALNT1Q10472 559 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-213ENST00000587604 P3H2Q8IVL5 708 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 PLD6Q8N2A8 252 aaKnown RBP12.74□□□□□ -0.37
DNMT1-213ENST00000587604 ZNF592Q92610 1267 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 PIGTQ969N2 578 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 TMBIM1Q969X1 311 aa12.74□□□□□ -0.37
DNMT1-213ENST00000587604 CNRIP1Q96F85 164 aaPredicted RBP12.74□□□□□ -0.37
DNMT1-213ENST00000587604 SLC35A4Q96G79 324 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms