RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 PDP2Q9P2J9 529 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 SCOCQ9UIL1 159 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 C3orf18Q9UK00 162 aa18.54■□□□□ 0.56
TRIM47-204ENST00000587339 OR2W5A6NFC9 320 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 A8MVJ9 347 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 JRKO75564 520 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 GNAO1P09471 354 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ACP2P11117 423 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 EPS8Q12929 822 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 PROX2Q3B8N5 592 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ANKRD34AQ69YU3 496 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 TMEM154Q6P9G4 183 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ZCCHC12Q6PEW1 402 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 PRR23CQ6ZRP0 262 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 RCBTB1Q8NDN9 531 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 DGAT2Q96PD7 388 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 PIP5K1AQ99755 562 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ARRDC1-AS1Q9H2J1 176 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ORC6Q9Y5N6 252 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 LYVE1Q9Y5Y7 322 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 DSPPQ9NZW4 1301 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 IGHV5-10-1A0A0J9YXX1 117 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 H0YAE9 185 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 J3KTA2 159 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 TNFRSF11BO00300 401 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ALOX5P09917 674 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 RHCEP18577 417 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 DUSP3P51452 185 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-204ENST00000587339 SPIBQ01892 262 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ACY1Q03154 408 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 CHRNEQ04844 493 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 YOD1Q5VVQ6 348 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-204ENST00000587339 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-204ENST00000587339 DPYSL5Q9BPU6 564 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 QRSL1Q9H0R6 528 aaKnown RBP18.53■□□□□ 0.56
TRIM47-204ENST00000587339 TOR3AQ9H497 397 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 SOX17Q9H6I2 414 aaPredicted RBP18.53■□□□□ 0.56
TRIM47-204ENST00000587339 CLDN16Q9Y5I7 305 aa18.53■□□□□ 0.56
TRIM47-204ENST00000587339 DSCR3O14972 297 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 FCMRO60667 390 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 COQ9O75208 318 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 CBX7O95931 251 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 PDX1P52945 283 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 RAD23AP54725 363 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 ADARB1P78563 741 aaKnown RBP18.52■□□□□ 0.56
TRIM47-204ENST00000587339 DSG2Q14126 1118 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 ARHGAP11BQ3KRB8 267 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 HMGN2P46Q86SG4 172 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 OR52R1Q8NGF1 315 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 FBXL20Q96IG2 436 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 OR1F2PQ96R84 312 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 ZNF304Q9HCX3 659 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 BATF3Q9NR55 127 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 DUSP22Q9NRW4 184 aa18.52■□□□□ 0.56
TRIM47-204ENST00000587339 TMEFF2Q9UIK5 374 aaPredicted RBP18.52■□□□□ 0.56
TRIM47-204ENST00000587339 A0A1B0GX78 115 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 CLIC3O95833 236 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 ALPPP05187 535 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 MYF6P23409 242 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 IGFBP5P24593 272 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 STT3AP46977 705 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 CDH12P55289 794 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 SERTAD2Q14140 314 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 RFX4Q33E94 735 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 EXOSC6Q5RKV6 272 aaKnown RBP18.51■□□□□ 0.55
TRIM47-204ENST00000587339 OR52J3Q8NH60 311 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 VANGL1Q8TAA9 524 aaPredicted RBP18.51■□□□□ 0.55
TRIM47-204ENST00000587339 STACQ99469 402 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 KIF17Q9P2E2 1029 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 KHNYNO15037 678 aaKnown RBP18.51■□□□□ 0.55
TRIM47-204ENST00000587339 TNFAIP8O95379 198 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 PABPC4LP0CB38 370 aaKnown RBP18.51■□□□□ 0.55
TRIM47-204ENST00000587339 S1PR1P21453 382 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 MYBPC1Q00872 1141 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 GANABQ14697 944 aaKnown RBP18.51■□□□□ 0.55
TRIM47-204ENST00000587339 ZNF311Q5JNZ3 666 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 TCEAL6Q6IPX3 200 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 ISLR2Q6UXK2 745 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 COX18Q8N8Q8 333 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 GPR151Q8TDV0 419 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 TCEAL3Q969E4 200 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 CCDC74BQ96LY2 380 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 NECTIN3Q9NQS3 549 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 LANCL2Q9NS86 450 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 MKLN1Q9UL63 735 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 SLC9A8Q9Y2E8 581 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 WDR45Q9Y484 360 aa18.51■□□□□ 0.55
TRIM47-204ENST00000587339 AGRPO00253 132 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 IFNA16P05015 189 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 FBLP22087 321 aaKnown RBP18.5■□□□□ 0.55
TRIM47-204ENST00000587339 DAPP51397 102 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 BIKQ13323 160 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 KDM4DQ6B0I6 523 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 FRRS1Q6ZNA5 592 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 MED25Q71SY5 747 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 ZNF605Q86T29 641 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 CYP4Z1Q86W10 505 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 ATG16L2Q8NAA4 619 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 ZG16BQ96DA0 208 aa18.5■□□□□ 0.55
TRIM47-204ENST00000587339 LOXL4Q96JB6 756 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms