RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 C17orf53Q8N3J3 647 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-216ENST00000586813 OR14L1PQ8NHC6 308 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 ZNF483Q8TF39 744 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-216ENST00000586813 SELENOMQ8WWX9 145 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 CNRIP1Q96F85 164 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-216ENST00000586813 FUT8Q9BYC5 575 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 PRODH2Q9UF12 536 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 PSME2Q9UL46 239 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 SNX6Q9UNH7 406 aa17.61■□□□□ 0.41
TRAF4-216ENST00000586813 EXO1Q9UQ84 846 aaKnown RBP17.61■□□□□ 0.41
TRAF4-216ENST00000586813 FRG2CA6NGY1 282 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 CLCA1A8K7I4 914 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 PPP6CO00743 305 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ERN1O75460 977 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 CBR3O75828 277 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 GOSR1O95249 250 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 COL6A2P12110 1019 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 PCSK2P16519 638 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 DRD5P21918 477 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 PPICP45877 212 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ALDH9A1P49189 494 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 EMDP50402 254 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 CDH13P55290 713 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 DCAF7P61962 342 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 MRPS35P82673 323 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 KEAP1Q14145 624 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 DEFB113Q30KQ7 82 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 FAM219BQ5XKK7 198 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ENPP6Q6UWR7 440 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 TAOK1Q7L7X3 1001 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 C1orf52Q8N6N3 182 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 WDSUB1Q8N9V3 476 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ZNF681Q96N22 645 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ZFP3Q96NJ6 502 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 HBEGFQ99075 208 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 PAFAH2Q99487 392 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 LRRC1Q9BTT6 524 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 SFXN3Q9BWM7 321 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 FAIM2Q9BWQ8 316 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 RBM24Q9BX46 236 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 MRPL46Q9H2W6 279 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 CDC42EP4Q9H3Q1 356 aaKnown RBP17.6■□□□□ 0.41
TRAF4-216ENST00000586813 PLEKHF2Q9H8W4 249 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 GALNT8Q9NY28 637 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 TRPS1Q9UHF7 1281 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 ZNF780BQ9Y6R6 833 aa17.6■□□□□ 0.41
TRAF4-216ENST00000586813 A8MT66 165 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TO15178 435 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TSPAN8P19075 237 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 SERPINB9P50453 376 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 GFRA1P56159 465 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TRA2BP62995 288 aaKnown RBP17.59■□□□□ 0.41
TRAF4-216ENST00000586813 HMGCS1Q01581 520 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 SRYQ05066 204 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 CKAP4Q07065 602 aaKnown RBP17.59■□□□□ 0.41
TRAF4-216ENST00000586813 ADGRE4PQ86SQ3 457 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 IFNEQ86WN2 208 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TRIM42Q8IWZ5 723 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 RDH11Q8TC12 318 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TMBIM1Q969X1 311 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 TM9SF2Q99805 663 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 MRPL57Q9BQC6 102 aaKnown RBP17.59■□□□□ 0.41
TRAF4-216ENST00000586813 YIPF4Q9BSR8 244 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 G6PC3Q9BUM1 346 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 C1QTNF3Q9BXJ4 246 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 NMRK1Q9NWW6 199 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 UTS2RQ9UKP6 389 aa17.59■□□□□ 0.41
TRAF4-216ENST00000586813 RPH3AQ9Y2J0 694 aaPredicted RBP17.59■□□□□ 0.41
TRAF4-216ENST00000586813 OR6C70A6NIJ9 312 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 RCBTB2O95199 551 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 SBK3P0C264 359 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 FOSL1P15407 271 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 CPA2P48052 419 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF628Q5EBL2 1059 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 PLXDC2Q6UX71 529 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 LUZP2Q86TE4 346 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 PLCZ1Q86YW0 608 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF675Q8TD23 568 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 TMCO6Q96DC7 493 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 DACH2Q96NX9 599 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 COL21A1Q96P44 957 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 BTBD9Q96Q07 612 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 UCN2Q96RP3 112 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 GSX1Q9H4S2 264 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-216ENST00000586813 TAS2R10Q9NYW0 307 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 CLCF1Q9UBD9 225 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 HEY2Q9UBP5 337 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 ZNF225Q9UK10 706 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 GPR55Q9Y2T6 319 aaPredicted RBP17.58■□□□□ 0.4
TRAF4-216ENST00000586813 WIF1Q9Y5W5 379 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 NAV3Q8IVL0 2385 aa17.58■□□□□ 0.4
TRAF4-216ENST00000586813 ABCB7O75027 752 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 OR4F21O95013 312 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 ESRRBO95718 433 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 HRGP04196 525 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 LHX2P50458 406 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 TCHHL1Q5QJ38 904 aaPredicted RBP17.57■□□□□ 0.4
TRAF4-216ENST00000586813 GCNT2Q8N0V5 402 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 TMEM151AQ8N4L1 468 aa17.57■□□□□ 0.4
TRAF4-216ENST00000586813 WNT2BQ93097 391 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms