RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ADAMTS18Q8TE60 1221 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 MMABQ96EY8 250 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 BARD1Q99728 777 aaKnown RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SMURF2Q9HAU4 748 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SIDT1Q9NXL6 827 aaKnown RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 MAT2BQ9NZL9 334 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 H0YIG0 161 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 PLOD3O60568 738 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 OR2B3O76000 313 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SLITRK5O94991 958 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 MT-CO3P00414 261 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 SLC35E2P0CK97 266 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CCKBRP32239 447 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CSTF2P33240 577 aaKnown RBP eCLIP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 AVPR1BP47901 424 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CRISP3P54108 245 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 EXOSC6Q5RKV6 272 aaKnown RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CDC73Q6P1J9 531 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 BBS10Q8TAM1 723 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 DOK4Q8TEW6 326 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CTHRC1Q96CG8 243 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 ZNF501Q96CX3 271 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 OR6C1Q96RD1 312 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 ZNF300Q96RE9 604 aaPredicted RBP19.09■□□□□ 0.65
ATG4D-204ENST00000586417 GABARAPL1Q9H0R8 117 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CUTCQ9NTM9 273 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CLDN16Q9Y5I7 305 aa19.09■□□□□ 0.65
ATG4D-204ENST00000586417 CSO75390 466 aaKnown RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 CT62P0C5K7 136 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 CCL4P13236 92 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 FPR1P21462 350 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 NT5EP21589 574 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 PRKACGP22612 351 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 DNAJA1P31689 397 aaKnown RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 CHN2P52757 468 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 IGLV3-21P80748 117 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 PUM1Q14671 1186 aaKnown RBP eCLIP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 PRAMEF8Q5VWM4 474 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 PRAMEF7Q5VXH5 474 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 DGAT2L6Q6ZPD8 337 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 WDR53Q7Z5U6 358 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 ZNF595Q8IYB9 648 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 SLC35A4Q96G79 324 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 COL21A1Q96P44 957 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 ZNF607Q96SK3 696 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 RBM4BQ9BQ04 359 aaKnown RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 RBM4Q9BWF3 364 aaKnown RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 AMBRA1Q9C0C7 1298 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 APMAPQ9HDC9 416 aa19.08■□□□□ 0.64
ATG4D-204ENST00000586417 IFT80Q9P2H3 777 aaPredicted RBP19.08■□□□□ 0.64
ATG4D-204ENST00000586417 SPTBN4Q9H254 2564 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 BLACEA4D250 179 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 PMS2P1A4D2B8 440 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 EFCAB7A8K855 629 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 CTNSO60931 367 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 GNAO1P09471 354 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 THRBP10828 461 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 KCNJ5P48544 419 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 ADARB1P78563 741 aaKnown RBP19.07■□□□□ 0.64
ATG4D-204ENST00000586417 HEPHL1Q6MZM0 1159 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 BMPERQ8N8U9 685 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 SLC16A11Q8NCK7 471 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 AGBL5Q8NDL9 886 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 NRBF2Q96F24 287 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 REEP1Q9H902 201 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 GIN1Q9NXP7 522 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 TMEFF2Q9UIK5 374 aaPredicted RBP19.07■□□□□ 0.64
ATG4D-204ENST00000586417 MRPS33Q9Y291 106 aaKnown RBP19.07■□□□□ 0.64
ATG4D-204ENST00000586417 SH3GLB1Q9Y371 365 aa19.07■□□□□ 0.64
ATG4D-204ENST00000586417 SAMHD1Q9Y3Z3 626 aaKnown RBP19.07■□□□□ 0.64
ATG4D-204ENST00000586417 H6PDO95479 791 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 FESP07332 822 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 ETS2P15036 469 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 CAPGP40121 348 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 XCR1P46094 333 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 ERV3-1Q14264 604 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 GNA13Q14344 377 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 LAPTM4AQ15012 233 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 FAM214AQ32MH5 1076 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 MARCH9Q86YJ5 346 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 DHRSXQ8N5I4 330 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 OR51Q1Q8NH59 317 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 RDH12Q96NR8 316 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 ZNF347Q96SE7 839 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 BTBD2Q9BX70 525 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 SLC38A1Q9H2H9 487 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 SOX17Q9H6I2 414 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-204ENST00000586417 LIPT1Q9Y234 373 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 DSPPQ9NZW4 1301 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 SEC16AO15027 2179 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 CCDC88CQ9P219 2028 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 A0A0G2JPF8 293 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 A0A1W2PNU3 283 aaPredicted RBP19.06■□□□□ 0.64
ATG4D-204ENST00000586417 HNRNPCL2B2RXH8 293 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 HNRNPCL3B7ZW38 293 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 ZNF749O43361 778 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 SERPINB7O75635 380 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 HNRNPCL4P0DMR1 293 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 ACP2P11117 423 aa19.06■□□□□ 0.64
ATG4D-204ENST00000586417 RRM2P31350 389 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms