RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CEACAM4O75871 244 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 SOX30O94993 753 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 NPPAP01160 153 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ALOX5P09917 674 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 DRD5P21918 477 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 MATN1P21941 496 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 PTPN6P29350 595 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 SSR4P51571 173 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 MLF1P58340 268 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ART3Q13508 389 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 COL28A1Q2UY09 1125 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 TRMT5Q32P41 509 aaKnown RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 PIGGQ5H8A4 983 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ACER2Q5QJU3 275 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 CDC73Q6P1J9 531 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ISLR2Q6UXK2 745 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 DLEU7Q6UYE1 221 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 ARMC10Q8N2F6 343 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ZNF441Q8N8Z8 693 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ADAMTS15Q8TE58 950 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ZFP90Q8TF47 636 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ADIPOR1Q96A54 375 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 C16orf58Q96GQ5 468 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 LMF2Q9BU23 707 aaKnown RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 NXF5Q9H1B4 397 aaKnown RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 RAD21L1Q9H4I0 556 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 EPS8L2Q9H6S3 715 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 ZNF552Q9H707 407 aaPredicted RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 TPT1P8Q9HAU6 139 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 Q9N2J8 555 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 ARL8BQ9NVJ2 186 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 GPATCH2Q9NW75 528 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 STMN3Q9NZ72 180 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 OR10H1Q9Y4A9 318 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 PCDHGB3Q9Y5G1 929 aa12.61□□□□□ -0.39
VMP1-203ENST00000586245 PCDHGA9Q9Y5G4 932 aaKnown RBP12.61□□□□□ -0.39
VMP1-203ENST00000586245 TMEM200CA6NKL6 621 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 DUXAA6NLW8 204 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 EVPLLA8MZ36 301 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 OR2J2O76002 312 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 ACP2P11117 423 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 ESRRAP11474 423 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 HOXB9P17482 250 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 GABRA3P34903 492 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 SOX11P35716 441 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 KRT20P35900 424 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 KHKP50053 298 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 NUDT2P50583 147 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 MNAT1P51948 309 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 POLE2P56282 527 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 PSPHP78330 225 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 RHDQ02161 417 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 NNATQ16517 81 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 C16orf47Q6ZP98 133 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 LINC00696Q6ZRV3 163 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 WDR53Q7Z5U6 358 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 RNF130Q86XS8 419 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 SLC15A4Q8N697 577 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 PNPT1Q8TCS8 783 aaKnown RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 GPR151Q8TDV0 419 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 ROPN1LQ96C74 230 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 LRRC58Q96CX6 371 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 AURKBQ96GD4 344 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 LMF1Q96S06 567 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 RASL10BQ96S79 203 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 STACQ99469 402 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 CGREF1Q99674 301 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 PIGUQ9H490 435 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 DUSP22Q9NRW4 184 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 GIN1Q9NXP7 522 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 SLC25A37Q9NYZ2 338 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 VAPAQ9P0L0 249 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 CORO2BQ9UQ03 480 aa12.6□□□□□ -0.39
VMP1-203ENST00000586245 GPR55Q9Y2T6 319 aaPredicted RBP12.6□□□□□ -0.39
VMP1-203ENST00000586245 PTPRQQ9UMZ3 2332 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TRBV5-3A0A0A0MS03 114 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CCT8L1PA6NM43 557 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TO15178 435 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 NKX2-2O95096 273 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 AGR2O95994 175 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CT45A8P0DMV1 189 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CT45A9P0DMV2 189 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CASRP41180 1078 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CRATP43155 626 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 MAGEA8P43361 318 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CPA2P48052 419 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 TMED10P49755 219 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 CASP9P55211 416 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 CORO7P57737 925 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 RPS26P62854 115 aaKnown RBP12.59□□□□□ -0.39
VMP1-203ENST00000586245 MXRA7P84157 204 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 PSG6Q00889 435 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 PLCXD2Q0VAA5 305 aa12.59□□□□□ -0.39
VMP1-203ENST00000586245 MFAP5Q13361 173 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms