RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 NEMP2A6NFY4 417 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IGLON5A6NGN9 336 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM72CH0Y354 149 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KIR2DS3K7RE56 304 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKRD28O15084 1053 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FLRT2O43155 660 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC28A2O43868 658 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 LDB3O75112 727 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AP2A2O94973 939 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 POP4O95707 220 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AK1P00568 194 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 UCHL3P15374 230 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NCF2P19878 526 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CD9P21926 228 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CDH3P22223 829 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PAICSP22234 425 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CCNCP24863 283 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RYKP34925 604 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC6A12P48065 614 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KPNA2P52292 529 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 HNRNPFP52597 415 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NDST1P52848 882 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EEF1A1P68104 462 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RELAQ04206 551 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TNK1Q13470 666 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ELAVL3Q14576 367 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KRTAP27-1Q3LI81 207 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KCTD21Q4G0X4 260 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ARMCX4Q5H9R4 360 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EARS2Q5JPH6 523 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM72AQ5TYM5 149 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ASPHD1Q5U4P2 390 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 EEF1A1P5Q5VTE0 462 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PMS2CLQ68D20 193 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NADSYN1Q6IA69 706 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM72DQ6L9T8 149 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SPSB3Q6PJ21 355 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 BNIPLQ7Z465 357 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PIP4P1Q86T03 277 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM72BQ86X60 149 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 STK40Q8N2I9 435 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 OLIG1Q8TAK6 271 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SSMEM1Q8WWF3 244 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RND1Q92730 232 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SNAPC3Q92966 411 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 POP5Q969H6 163 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC127Q96BQ5 260 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CCDC42Q96M95 316 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNK16Q96T55 309 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KRT12Q99456 494 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CCT7Q99832 543 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CAPS2Q9BXY5 557 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ZNF334Q9HCZ1 680 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SPHK2Q9NRA0 654 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 THAP10Q9P2Z0 257 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CRNNQ9UBG3 495 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ENTPD4Q9Y227 616 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ITPR1Q14643 2758 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PTPRDP23468 1912 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MN1Q10571 1320 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CTAGE15A4D2H0 777 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ANKRD66B4E2M5 251 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 F8VZ95 297 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM178BH3BS89 294 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IFNL4K9M1U5 179 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KCNN4O15554 427 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SPRY1O43609 319 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SMPD2O60906 423 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC22A3O75751 556 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 NEBLO76041 1014 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ANP32DO95626 131 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PLGP00747 810 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 HBQ1P09105 142 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 IFI6P09912 130 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CTAGE8P0CG41 777 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RALBP11234 206 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 MLNP12872 115 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GOT1P17174 413 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CHRNB2P17787 502 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TCP1P17987 556 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GABRR2P28476 465 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 ADSSP30520 456 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 AKT2P31751 481 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 RABIFP47224 123 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 DLK1P80370 383 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 FAM27E3Q08E93 113 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 KLF9Q13886 244 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CDO1Q16878 200 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GOLGA7BQ2TAP0 167 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CTU2Q2VPK5 515 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 TMEM52BQ4KMG9 183 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 STPG1Q5TH74 334 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 HIST2H2BCQ6DN03 193 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 HIST2H2BDQ6DRA6 164 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 SLC39A4Q6P5W5 647 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PAPD4Q6PIY7 484 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 PARM1Q6UWI2 310 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 GDPD4Q6W3E5 623 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 B3GLCTQ6Y288 498 aa1.78□□□□□ -2.12
SMCHD1-211ENST00000584897 CERS6Q6ZMG9 384 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms