RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 LHFPL3Q86UP9 236 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 NKAIN4Q8IVV8 208 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 OR52R1Q8NGF1 315 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 CREB3L4Q8TEY5 395 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 OR7D2Q96RA2 312 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 ALOXE3Q9BYJ1 711 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 C8orf33Q9H7E9 229 aaPredicted RBP9.65□□□□□ -0.87
RFFL-212ENST00000584655 POLE4Q9NR33 117 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 MS4A12Q9NXJ0 267 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 OBP2AQ9NY56 170 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 LRRK1Q38SD2 2015 aa9.65□□□□□ -0.87
RFFL-212ENST00000584655 A0A1W2PPC4 97 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 DYTNA2CJ06 578 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 CCNB2O95067 398 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 UQCRC2P22695 453 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 SLC5A2P31639 672 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 TGM4P49221 684 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 NR1H2P55055 460 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 ZP2Q05996 745 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 RPA4Q13156 261 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 TTC23Q5W5X9 447 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 PLEKHG7Q6ZR37 379 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 GPR135Q8IZ08 494 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 TIMM29Q9BSF4 260 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 C3orf14Q9HBI5 128 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 MYNNQ9NPC7 610 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 DTX4Q9Y2E6 619 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 M0R3G1 203 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 RNASET2O00584 256 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 SLC2A10O95528 541 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 AZGP1P25311 298 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 BMP8BP34820 402 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 TOP3AQ13472 1001 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 LRIT3Q3SXY7 679 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 PATL1Q86TB9 770 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 PTRH1Q86Y79 214 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 OXR1Q8N573 874 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 NBEAQ8NFP9 2946 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 NLGN4YQ8NFZ3 816 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 SLC7A13Q8TCU3 470 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 GAL3ST1Q99999 423 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 COPS4Q9BT78 406 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 OSBPL10Q9BXB5 764 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 BHLHE41Q9C0J9 482 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 OR6C2Q9NZP2 312 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 MALT1Q9UDY8 824 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 MKL2Q9ULH7 1088 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 AQP9O43315 295 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 REM1O75628 298 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 SERPINB7O75635 380 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 EIF2DP41214 584 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 RPS27P42677 84 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 RABIFP47224 123 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 PRR5P85299 388 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 ANKDD1AQ495B1 522 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 FCRL6Q6DN72 434 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 NRMQ8IXM6 262 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 GPR32P1Q8NGA4 272 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 WDR36Q8NI36 951 aaKnown RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 ADAMTS16Q8TE57 1224 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 ZNF300Q96RE9 604 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 ZNF607Q96SK3 696 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 MCHR1Q99705 422 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 AKIRIN1Q9H9L7 192 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 PAK1IP1Q9NWT1 392 aaPredicted RBP9.64□□□□□ -0.87
RFFL-212ENST00000584655 P2RX2Q9UBL9 471 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 SPACA6W5XKT8 324 aa9.64□□□□□ -0.87
RFFL-212ENST00000584655 VILLO15195 856 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SCO2O43819 266 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PCDH1Q08174 1060 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TOMM20Q15388 145 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 LRIF1Q5T3J3 769 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 CASP12Q6UXS9 341 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 KDM8Q8N371 416 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 OR4K5Q8NGD3 323 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TSPEARQ8WU66 669 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 OR5P2Q8WZ92 322 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 RSPO3Q9BXY4 272 aaPredicted RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 DPH1Q9BZG8 443 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PCBD2Q9H0N5 130 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 FTSJ1Q9UET6 329 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 RSL24D1Q9UHA3 163 aaKnown RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 TECTAO75443 2155 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TICRRQ7Z2Z1 1910 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 TRAV27A0A087WT01 109 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 A0A1B0GVC2 190 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SMIM31A0A1B0GVY4 71 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 C1orf226A1L170 272 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 A6NIN4 97 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 SLC1A7O00341 560 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PROM1O43490 865 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 UGDHO60701 494 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 PEPDP12955 493 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 ITGADQ13349 1161 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 MAPK14Q16539 360 aa9.63□□□□□ -0.87
RFFL-212ENST00000584655 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
RFFL-212ENST00000584655 CBLL1Q75N03 491 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms