RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TMEM184AQ6ZMB5 413 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 PARP16Q8N5Y8 322 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 IQCF1Q8N6M8 205 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 OR6C2Q9NZP2 312 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 TMA7Q9Y2S6 64 aaKnown RBP12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF860A6NHJ4 632 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ZAR1LA6NP61 321 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 NOTOA8MTQ0 251 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 E9PQ18 207 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FAAHO00519 579 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FHP07954 510 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ADORA3P0DMS8 318 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 MPIP34949 423 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 XKP51811 444 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 OLR1P78380 273 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 RGS1Q08116 209 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 MLC1Q15049 377 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 DEFB134Q4QY38 66 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF770Q6IQ21 691 aaPredicted RBP12.86□□□□□ -0.35
SRSF1-205ENST00000582730 SLC48A1Q6P1K1 146 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 CASP12Q6UXS9 341 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 OR4N5Q8IXE1 308 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 NUP43Q8NFH3 380 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 OR6T1Q8NGN1 323 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 RPLP0P6Q8NHW5 317 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 SIGLEC11Q96RL6 698 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 PLCXD1Q9NUJ7 323 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 GON4LQ3T8J9 2241 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FAM172BPA6NC97 362 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 A8MVJ9 347 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 M0R082 166 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 NR2F6P10588 404 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 OSMP13725 252 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 F3P13726 295 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 GABRB1P18505 474 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 NDUFV2P19404 249 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 PXNP49023 591 aaPredicted RBP12.86□□□□□ -0.35
SRSF1-205ENST00000582730 TUBA1BP68363 451 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 RAB30Q15771 203 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF425Q6IV72 752 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 ASPGQ86U10 573 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FRMD1Q8N878 549 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 WDR36Q8NI36 951 aaKnown RBP12.86□□□□□ -0.35
SRSF1-205ENST00000582730 S1PR5Q9H228 398 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 MGAT4BQ9UQ53 548 aa12.86□□□□□ -0.35
SRSF1-205ENST00000582730 PRR19A6NJB7 356 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SSX4O60224 188 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SLC35G6P0C7Q6 338 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SNRPNP63162 240 aaKnown RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.354e-12■□□□□ 9.4
SRSF1-205ENST00000582730 SOWAHCQ53LP3 525 aaPredicted RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF542PQ5EBM4 170 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 ARMCX4Q5H9R4 360 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 AGAP6Q5VW22 663 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 MRM1Q6IN84 353 aaKnown RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 PGBD2Q6P3X8 592 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 PODNL1Q6PEZ8 512 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 C16orf62Q7Z3J2 963 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 VN1R4Q7Z5H5 301 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 BCDIN3DQ7Z5W3 292 aaKnown RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 IQCHQ86VS3 1027 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 OR56A1Q8NGH5 318 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 BBS10Q8TAM1 723 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 ZNF764Q96H86 408 aaPredicted RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 BMFQ96LC9 184 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 AGAP4Q96P64 663 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SPATA5L1Q9BVQ7 753 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 C6orf106Q9H6K1 298 aaPredicted RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SPTBN5Q9NRC6 3674 aaKnown RBP12.85□□□□□ -0.35
SRSF1-205ENST00000582730 TCRBV21S2A2A0A5A6 115 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 ENTPD6O75354 484 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 CPN2P22792 545 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 SMIM11AP58511 58 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 ID2Q02363 134 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 FUT5Q11128 374 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 OR7D2Q96RA2 312 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 CHCHD6Q9BRQ6 235 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 A4GNTQ9UNA3 340 aa12.85□□□□□ -0.35
SRSF1-205ENST00000582730 CENPBD1B2RD01 187 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 DSCR3O14972 297 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 EMC8O43402 210 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 PROM1O43490 865 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 HNRNPA2B1P22626 353 aaKnown RBP12.84□□□□□ -0.35
SRSF1-205ENST00000582730 NDUFS1P28331 727 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 UGT2B10P36537 528 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 RACK1P63244 317 aaKnown RBP12.84□□□□□ -0.35
SRSF1-205ENST00000582730 SIM1P81133 766 aaPredicted RBP12.84□□□□□ -0.35
SRSF1-205ENST00000582730 ADAM15Q13444 863 aa12.84□□□□□ -0.35
SRSF1-205ENST00000582730 TMEM92Q6UXU6 159 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms