RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 CLEC1AQ8NC01 280 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 C17orf47Q8NEP4 570 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 OR7G2Q8NG99 324 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 OR56A1Q8NGH5 318 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 OR4A15Q8NGL6 344 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 KAT2AQ92830 837 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 NCLNQ969V3 563 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 FAM120BQ96EK7 910 aaKnown RBP11.26□□□□□ -0.61
CCDC84-209ENST00000580556 MS4A4EQ96PG1 132 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 CNPPD1Q9BV87 410 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 OR10A5Q9H207 317 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 CXorf36Q9H7Y0 433 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 ATP13A2Q9NQ11 1180 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 DDX18Q9NVP1 670 aaKnown RBP11.26□□□□□ -0.61
CCDC84-209ENST00000580556 PRODH2Q9UF12 536 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 ERVK-11Q9UQG0 969 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 GMEB1Q9Y692 573 aa11.26□□□□□ -0.61
CCDC84-209ENST00000580556 CCDC88CQ9P219 2028 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 OTOGQ6ZRI0 2925 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 TTC36A6NLP5 189 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 HRKO00198 91 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 COX4I1P13073 169 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 EFNA1P20827 205 aaPredicted RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 UQCRC2P22695 453 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 PTGER1P34995 402 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 CCT3P49368 545 aaKnown RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 EMDP50402 254 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 PSPHP78330 225 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 TXNL4AP83876 142 aaKnown RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 CBX1P83916 185 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 Q0VFX4 171 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 C6orf10Q5SRN2 563 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 ZCCHC12Q6PEW1 402 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 SLC2A7Q6PXP3 512 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 FAM111BQ6SJ93 734 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 HSDL2Q6YN16 418 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 TRPM8Q7Z2W7 1104 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 RETREG3Q86VR2 466 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 LGI4Q8N135 537 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 Q8NA96 180 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 PCYOX1LQ8NBM8 494 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 NUBPLQ8TB37 319 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 HOXB13Q92826 284 aaPredicted RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 NEURL3Q96EH8 262 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 INPP5KQ9BT40 448 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 NUDT9Q9BW91 350 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 MFRPQ9BY79 579 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 PAIP1Q9H074 479 aaKnown RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 ZCCHC3Q9NUD5 404 aaKnown RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 MAP10Q9P2G4 905 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 ZNF223Q9UK11 482 aaPredicted RBP11.25□□□□□ -0.61
CCDC84-209ENST00000580556 POLQO75417 2590 aa11.25□□□□□ -0.61
CCDC84-209ENST00000580556 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 TRBV5-3A0A0A0MS03 114 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 RNF103-CHMP3A0A140T963 221 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 FBP2O00757 339 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 CDK2AP1O14519 115 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 ZFAND5O76080 213 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SOX30O94993 753 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 KCNH1O95259 989 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 CPSF4O95639 269 aaKnown RBP11.24□□□□□ -0.61
CCDC84-209ENST00000580556 ABCB1P08183 1280 aaPredicted RBP11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SSTR4P31391 388 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 CDKN2CP42773 168 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 DCAF7P61962 342 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 DUSP8Q13202 625 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 GAB1Q13480 694 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 MYBPC3Q14896 1274 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 EXOSC7Q15024 291 aaKnown RBP11.24□□□□□ -0.61
CCDC84-209ENST00000580556 EBPQ15125 230 aaKnown RBP11.24□□□□□ -0.61
CCDC84-209ENST00000580556 TRMT5Q32P41 509 aaKnown RBP11.24□□□□□ -0.61
CCDC84-209ENST00000580556 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SPDYE7PQ495Y7 208 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 PAGE3Q5JUK9 113 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SAXO2Q658L1 398 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 REP15Q6BDI9 236 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 H3F3CQ6NXT2 135 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 DLEU7Q6UYE1 221 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SLC29A4Q7RTT9 530 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 C9orf40Q8IXQ3 194 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 ZNF321PQ8N8H1 164 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 ZNF441Q8N8Z8 693 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 NUP43Q8NFH3 380 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 OR52R1Q8NGF1 315 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 OR5L2Q8NGL0 311 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 C16orf52Q8NHV5 167 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 GIMAP5Q96F15 307 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 VSTM2LQ96N03 204 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 DEFB126Q9BYW3 111 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 WWTR1Q9GZV5 400 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 LHPPQ9H008 270 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 ING2Q9H160 280 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 GIN1Q9NXP7 522 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 SNX8Q9Y5X2 465 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 CROCCQ5TZA2 2017 aa11.24□□□□□ -0.61
CCDC84-209ENST00000580556 CSMD2Q7Z408 3487 aa11.23□□□□□ -0.61
CCDC84-209ENST00000580556 SCN2AQ99250 2005 aa11.23□□□□□ -0.61
CCDC84-209ENST00000580556 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms