RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 INTS10Q9NVR2 710 aaKnown RBP12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 FBXO34Q9NWN3 711 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 XPR1Q9UBH6 696 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 POU2F3Q9UKI9 436 aa12.47□□□□□ -0.41
CSNK1D-213ENST00000580446 H7C417 338 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 GCM2O75603 506 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 HAUS5O94927 633 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 AIFM1O95831 613 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 OPN1LWP04000 364 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 RHOXF2BP0C7M4 288 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 C1GALT1C1LP0DN25 315 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 FABP6P51161 128 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 HMGCS1Q01581 520 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 SGCBQ16585 318 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 MFSD12Q6NUT3 480 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 SLCO4C1Q6ZQN7 724 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 ST13P4Q8IZP2 240 aaPredicted RBP12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 FBXL14Q8N1E6 418 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 OR2W6PQ8NHA6 318 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 FBF1Q8TES7 1133 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 IL22Q9GZX6 179 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 EHD1Q9H4M9 534 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 ESM1Q9NQ30 184 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 SLC17A6Q9P2U8 582 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 EFR3BQ9Y2G0 817 aa12.46□□□□□ -0.41
CSNK1D-213ENST00000580446 ANKDD1BA6NHY2 528 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 EEDO75530 441 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 CLEC3AO75596 197 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 ALDOAP04075 364 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 GPX3P22352 226 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 APEX1P27695 318 aaKnown RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 CDKN2DP55273 166 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 PLCXD2Q0VAA5 305 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 CCNIQ14094 377 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 TCEAL1Q15170 157 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 DEPDC1Q5TB30 811 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 ANKS4BQ8N8V4 417 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 HSD17B8Q92506 261 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 SORCS2Q96PQ0 1159 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 HBEGFQ99075 208 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 NAP1L3Q99457 506 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 DHRS9Q9BPW9 319 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 STMN4Q9H169 189 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 NHEJ1Q9H9Q4 299 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 BFARQ9NZS9 450 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 ING1Q9UK53 422 aaPredicted RBP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 KCNE2Q9Y6J6 123 aa12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSNK1D-213ENST00000580446 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 ADAP00813 363 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 EPB42P16452 691 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 HK1P19367 917 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 EIF1AXP47813 144 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 KCNC1P48547 511 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 RGS4P49798 205 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 HNRNPH2P55795 449 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 SLAMF1Q13291 335 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 FBLN7Q53RD9 439 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 RBM20Q5T481 1227 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 C11orf63Q6NUN7 778 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 SLC22A25Q6T423 547 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 NUP54Q7Z3B4 507 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 STK32CQ86UX6 486 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 GABRG1Q8N1C3 465 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 ZNF615Q8N8J6 731 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 LINC01356Q8N9X3 169 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 GMPPAQ96IJ6 420 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 KCNC2Q96PR1 638 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 SNX18Q96RF0 628 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 ITPAQ9BY32 194 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 OR10A4Q9H209 315 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 ZNF490Q9ULM2 529 aaPredicted RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 SOX13Q9UN79 622 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 WBP11Q9Y2W2 641 aaKnown RBP12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 MAD1L1Q9Y6D9 718 aa12.44□□□□□ -0.42
CSNK1D-213ENST00000580446 NPIPA5A0A0B4J1W7 369 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 NPIPA7E9PJI5 369 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 GMFGO60234 142 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 PRAMEF4O60810 478 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 CDH16O75309 829 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 NME6O75414 186 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 WDR47O94967 919 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 NPIPA8P0DM63 369 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 HIST1H1TP22492 207 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 GRK2P25098 689 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 SSR2P43308 183 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 RWDD2BP57060 319 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 EEFSECP57772 596 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 THOC5Q13769 683 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 FBXO48Q5FWF7 155 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 SFRP5Q5T4F7 317 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 PRAMEF9Q5VWM5 478 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 RNF175Q8N4F7 328 aa12.43□□□□□ -0.42
CSNK1D-213ENST00000580446 OR4K17Q8NGC6 315 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms