RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CITED1Q99966 193 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 RAB11FIP5Q9BXF6 653 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MRPL37Q9BZE1 423 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 BLZF1Q9H2G9 400 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ARRDC1-AS1Q9H2J1 176 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 DPEP2Q9H4A9 486 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 C5orf66Q9H5L9 145 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 TLE6Q9H808 572 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 VIPAS39Q9H9C1 493 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PCDH9Q9HC56 1237 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 AGPAT3Q9NRZ7 376 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 THSD1Q9NS62 852 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MRPL22Q9NWU5 206 aaKnown RBP2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PLEK2Q9NYT0 353 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PIPOXQ9P0Z9 390 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 GCNT4Q9P109 453 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 KLHL9Q9P2J3 617 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 IL36RNQ9UBH0 155 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 DAPK2Q9UIK4 370 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 NSG2Q9Y328 171 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 PCDHAC2Q9Y5I4 1007 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 MMP24Q9Y5R2 645 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ETV7Q9Y603 341 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 NPTNQ9Y639 398 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 SBF2Q86WG5 1849 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 UMODL1Q5DID0 1318 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 SBNO1A3KN83 1393 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CASKIN1Q8WXD9 1431 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 ATP7BP35670 1465 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 CDC42BPGQ6DT37 1551 aa2.83□□□□□ -1.96
KPNB1-208ENST00000580019 A0A1W2PRB8 838 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 OR5K3A6NET4 321 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TUBAL3A6NHL2 446 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 IFITM10A6NMD0 228 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 C9JVG2 144 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 GOLGA8TH3BQL2 631 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SMIM22K7EJ46 135 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF701M0R085 212 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TULP2O00295 520 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 FOXE1O00358 373 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ABCD4O14678 606 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TNFRSF13BO14836 293 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ZSCAN12O43309 604 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 AKR7A2O43488 359 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TPST2O60704 377 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SAP30O75446 220 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 BCAR3O75815 825 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 DFFBO76075 338 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PGK1P00558 417 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 APOHP02749 345 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CYP1A2P05177 515 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CRYGCP07315 174 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 LYNP07948 512 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 FGF2P09038 288 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 NHLRC4P0CG21 123 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF23P17027 643 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 MSH3P20585 1137 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 GNLYP22749 145 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 MATKP42679 507 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CDKN2AP42771 156 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 NPY2RP49146 381 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CCR4P51679 360 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CLDN8P56748 225 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CLDN17P56750 224 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SEC61GP60059 68 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 OSTNP61366 133 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 YWHAGP61981 247 aaKnown RBP eCLIP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 RPS13P62277 151 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CDKL1Q00532 357 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 GHRHRQ02643 423 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 DMPKQ09013 629 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CEACAM7Q14002 265 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 DHX34Q14147 1143 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SF3B4Q15427 424 aaKnown RBP eCLIP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SYPL1Q16563 259 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CLPPQ16740 277 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 FAM83EQ2M2I3 478 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PARP6Q2NL67 630 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ASPRV1Q53RT3 343 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 FSCBQ5H9T9 825 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 WLSQ5T9L3 541 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 NDUFAF5Q5TEU4 345 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 FAM69BQ5VUD6 431 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 ZNF776Q68DI1 518 aaPredicted RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PDPK2PQ6A1A2 396 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PYHIN1Q6K0P9 492 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 CDC42EP5Q6NZY7 148 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SLC27A4Q6P1M0 643 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 DOK6Q6PKX4 331 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 SLC16A12Q6ZSM3 486 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 KCTD8Q6ZWB6 473 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 G2E3Q7L622 706 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 NLRP9Q7RTR0 991 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TRMT1LQ7Z2T5 733 aaKnown RBP2.82□□□□□ -1.96
KPNB1-208ENST00000580019 COX8CQ7Z4L0 72 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 GPBP1Q86WP2 473 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 PTOV1Q86YD1 416 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 TMEM139Q8IV31 216 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 GPALPP1Q8IXQ4 340 aa2.82□□□□□ -1.96
KPNB1-208ENST00000580019 EFCAB13Q8IY85 973 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms