RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 FAIMQ9NVQ4 179 aa9.79□□□□□ -0.84
GGA3-206ENST00000578773 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.79□□□□□ -0.84
GGA3-206ENST00000578773 TRMT6Q9UJA5 497 aaKnown RBP9.79□□□□□ -0.84
GGA3-206ENST00000578773 PCDHB10Q9UN67 800 aa9.79□□□□□ -0.84
GGA3-206ENST00000578773 SOX13Q9UN79 622 aa9.79□□□□□ -0.84
GGA3-206ENST00000578773 WBP11Q9Y2W2 641 aaKnown RBP9.79□□□□□ -0.84
GGA3-206ENST00000578773 EMC9Q9Y3B6 208 aa9.79□□□□□ -0.84
GGA3-206ENST00000578773 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
GGA3-206ENST00000578773 A0A088AWK7 358 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 UQCRHLA0A096LP55 91 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 TRIM77I1YAP6 450 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 NME6O75414 186 aaPredicted RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 CSF3P09919 207 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 PEPDP12955 493 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 ZNF10P21506 573 aaPredicted RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 TERF1P54274 439 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 CTBP2P56545 445 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 RPP38P78345 283 aaKnown RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 FBLN7Q53RD9 439 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 FBXO48Q5FWF7 155 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 HLA-DQA1Q5Y7H0 255 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 C11orf63Q6NUN7 778 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 TMEM81Q6P7N7 255 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 NUFIP2Q7Z417 695 aaKnown RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 GGNQ86UU5 652 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 MYO1HQ8N1T3 1032 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 ANKS4BQ8N8V4 417 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 ZDHHC22Q8N966 263 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 RBM4Q9BWF3 364 aaKnown RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 ITPAQ9BY32 194 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 IL22Q9GZX6 179 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 RPF2Q9H7B2 306 aaKnown RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 NHEJ1Q9H9Q4 299 aaPredicted RBP9.78□□□□□ -0.84
GGA3-206ENST00000578773 DNAJC11Q9NVH1 559 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 XPR1Q9UBH6 696 aa9.78□□□□□ -0.84
GGA3-206ENST00000578773 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.78□□□□□ -0.84
GGA3-206ENST00000578773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.78□□□□□ -0.84
GGA3-206ENST00000578773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 OR2M5A3KFT3 312 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 OPN1LWP04000 364 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 HIST1H2AGP0C0S8 130 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 KRT15P19012 456 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 HIST1H2ADP20671 130 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 HIST1H1TP22492 207 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 IL32P24001 234 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 AGTR1P30556 359 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 GAS1P54826 345 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 NRG3P56975 720 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 SRSF4Q08170 494 aaKnown RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 RCN2Q14257 317 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 OASLQ15646 514 aaKnown RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 ZSWIM7Q19AV6 140 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 SFRP5Q5T4F7 317 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 RAET1LQ5VY80 246 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 PALM2Q8IXS6 379 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 PIAS4Q8N2W9 510 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 METTL25Q8N6Q8 603 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 ZNF418Q8TF45 676 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 GMPPAQ96IJ6 420 aaPredicted RBP9.77□□□□□ -0.85
GGA3-206ENST00000578773 HIST1H2AHQ96KK5 128 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 NPAS1Q99742 590 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 HIST1H2AJQ99878 128 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 DHRS9Q9BPW9 319 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 H2AFJQ9BTM1 129 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 OR10A5Q9H207 317 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 CCDC68Q9H2F9 335 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 CXorf21Q9HAI6 301 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 SLC17A6Q9P2U8 582 aa9.77□□□□□ -0.85
GGA3-206ENST00000578773 WNK2Q9Y3S1 2297 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 ANKDD1BA6NHY2 528 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 PFDN6O15212 129 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 WDR47O94967 919 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 SLU7O95391 586 aaKnown RBP9.76□□□□□ -0.85
GGA3-206ENST00000578773 PLGP00747 810 aaPredicted RBP9.76□□□□□ -0.85
GGA3-206ENST00000578773 ADAP00813 363 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 FESP07332 822 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 HK1P19367 917 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 IL11P20809 199 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 S1PR1P21453 382 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 GRK2P25098 689 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 EDNRAP25101 427 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 APEX1P27695 318 aaKnown RBP9.76□□□□□ -0.85
GGA3-206ENST00000578773 KCNC1P48547 511 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 FABP6P51161 128 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 CDH15P55291 814 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 TNFRSF17Q02223 184 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 PLCXD2Q0VAA5 305 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 MAP4K2Q12851 820 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 SLAMF1Q13291 335 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 CCNIQ14094 377 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 EXOSC7Q15024 291 aaKnown RBP9.76□□□□□ -0.85
GGA3-206ENST00000578773 TRIP10Q15642 601 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 STK11Q15831 433 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 PPP1R3AQ16821 1122 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 CASC4Q6P4E1 433 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 TFAP2EQ6VUC0 442 aa9.76□□□□□ -0.85
GGA3-206ENST00000578773 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
GGA3-206ENST00000578773 NUP54Q7Z3B4 507 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms