RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 EIF3KQ9UBQ5 218 aaKnown RBP1.55□□□□□ -2.16
TOP2A-202ENST00000577541 KLHL21Q9UJP4 597 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 ABCG2Q9UNQ0 655 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 MTF2Q9Y483 593 aaPredicted RBP1.55□□□□□ -2.16
TOP2A-202ENST00000577541 RNF115Q9Y4L5 304 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 KIAA1217Q5T5P2 1943 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 RALGAPA1Q6GYQ0 2036 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 TNRQ92752 1358 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 ARHGAP23Q9P227 1491 aa1.55□□□□□ -2.16
TOP2A-202ENST00000577541 TMEM89A2RUT3 159 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 SLC15A5A6NIM6 579 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 EFCAB7A8K855 629 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 RSPH10B2B2RC85 870 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 C19orf81C9J6K1 198 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 IGHV3-23P01764 117 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 HSPB1P04792 205 aaKnown RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 HSP90AB1P08238 724 aaKnown RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ABHD2P08910 425 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 RSPH10BP0C881 870 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 SLC35E2P0CK97 266 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 RPS2P15880 293 aaKnown RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 PRDX6P30041 224 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 AKT2P31751 481 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 CD86P42081 329 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ALDH3B2P48448 385 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ARHGDIBP52566 201 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 STARD6P59095 220 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 HERV-K104P63124 156 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 IL1RL1Q01638 556 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF85Q03923 595 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 UBXN1Q04323 297 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 GFPT1Q06210 699 aaPredicted RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF33BQ06732 778 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 OVGP1Q12889 678 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ASAH1Q13510 395 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 GIT2Q14161 759 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 MORF4L2Q15014 288 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 PDK1Q15118 436 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 CD226Q15762 336 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 STX1AQ16623 288 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 SHROOM1Q2M3G4 852 aaPredicted RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 CCDC14Q49A88 953 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 TMEM52BQ4KMG9 183 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 IFI44LQ53G44 452 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 MS4A13Q5J8X5 152 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 DDI2Q5TDH0 399 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF410Q86VK4 478 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF677Q86XU0 584 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 UNC45BQ8IWX7 931 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 FBXW8Q8N3Y1 598 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 OR4A16Q8NH70 328 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF671Q8TAW3 534 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 URGCPQ8TCY9 931 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 RNF138Q8WVD3 245 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 P3H4Q92791 437 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 ELSPBP1Q96BH3 223 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 CXorf58Q96LI9 332 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 DPH7Q9BTV6 452 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 SIRPDQ9H106 197 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 SLC25A19Q9HC21 320 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 CENPMQ9NSP4 180 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 DDX28Q9NUL7 540 aaKnown RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 DPM3Q9P2X0 92 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 FOXA2Q9Y261 457 aaPredicted RBP1.54□□□□□ -2.16
TOP2A-202ENST00000577541 KNSTRNQ9Y448 316 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 KIF7Q2M1P5 1343 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 RAD54L2Q9Y4B4 1467 aa1.54□□□□□ -2.16
TOP2A-202ENST00000577541 NPIPA5A0A0B4J1W7 369 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 C13orf42A0A1B0GVH6 325 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 MACROD2A1Z1Q3 448 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 FAM231BA6NCW3 169 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 MFSD2BA6NFX1 497 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 NPIPA5E9PKD4 350 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 DDX39AO00148 427 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 ARPC1BO15143 372 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 GMNNO75496 209 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 CRCPO75575 148 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 STAM2O75886 525 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 REC8O95072 547 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 OAS1P00973 400 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 SLC4A1P02730 911 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 SERPINF2P08697 491 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 H2AFZP0C0S5 128 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF17P17021 662 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 AHCYP23526 432 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 MAT2AP31153 395 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 P2RY4P51582 365 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 AFF2P51816 1311 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 ZNF131P52739 623 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 STX17P56962 302 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 SRP54P61011 504 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 GALK2Q01415 458 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 FUT7Q11130 342 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 CDC37Q16543 378 aaPredicted RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 SBK1Q52WX2 424 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 MPPE1Q53F39 396 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 CELF3Q5SZQ8 465 aaKnown RBP1.53□□□□□ -2.16
TOP2A-202ENST00000577541 SEL1L2Q5TEA6 688 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 Q6P435 159 aa1.53□□□□□ -2.16
TOP2A-202ENST00000577541 ATRAIDQ6UW56 229 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms