RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 DIMT1Q9UNQ2 313 aaKnown RBP2.04□□□□□ -2.08
COPS3-213ENST00000577210 KIF3AQ9Y496 699 aa2.04□□□□□ -2.08
COPS3-213ENST00000577210 NPC1L1Q9UHC9 1359 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 IGHV3-16A0A0C4DH30 117 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 SRRM4A7MD48 611 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 ZNF724A8MTY0 619 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 E9PAM4 449 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 K7ERI5 159 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 LGALS8O00214 317 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 CYB561D2O14569 222 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 EI24O14681 340 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 MCF2LO15068 1137 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 LANCL1O43813 399 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 GMFGO60234 142 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 GPRIN2O60269 458 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 PRAMEF12O95522 483 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 APBB3O95704 486 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 GOT2P00505 430 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 OR9G9P0C7N8 305 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 RRASP10301 218 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 CYP11B1P15538 503 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ATP6V1C1P21283 382 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 IL4RP24394 825 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 PRDX2P32119 198 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ID1P41134 155 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 HNMTP50135 292 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ATP4BP51164 291 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 KRTAP10-5P60370 271 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 RPL27P61353 136 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 HERVK_113P63132 956 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ERVK-8P63133 956 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 SNTB2Q13425 540 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 PDIA5Q14554 519 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 LPAL2Q16609 132 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 C15orf32Q32M92 178 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ANKRD55Q3KP44 614 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 NADK2Q4G0N4 442 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 IL23RQ5VWK5 629 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 NEPROQ6NW34 567 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 CEACAM19Q7Z692 300 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 YRDCQ86U90 279 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 SERINC5Q86VE9 423 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 GRAMD2AQ8IUY3 354 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 WDR49Q8IV35 697 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 UNC5CLQ8IV45 518 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 MINDY2Q8NBR6 621 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 DENND6BQ8NEG7 585 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 OR2T34Q8NGX1 318 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 FBXO30Q8TB52 745 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 TMEM45BQ96B21 275 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ANKRD9Q96BM1 317 aaPredicted RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 FOXN4Q96NZ1 517 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 JPH2Q9BR39 696 aaPredicted RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 CBWD1Q9BRT8 395 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 WRAP53Q9BUR4 548 aaKnown RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 ZNF416Q9BWM5 594 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ERVK-6Q9BXR3 956 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 CXXC4Q9H2H0 198 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.03□□□□□ -2.08
COPS3-213ENST00000577210 CUTCQ9NTM9 273 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 RAI14Q9P0K7 980 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ZNF581Q9P0T4 197 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 ZNF490Q9ULM2 529 aaPredicted RBP2.03□□□□□ -2.08
COPS3-213ENST00000577210 SMC3Q9UQE7 1217 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 DHRS7Q9Y394 339 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 MFHAS1Q9Y4C4 1052 aa2.03□□□□□ -2.08
COPS3-213ENST00000577210 KDRP35968 1356 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 ZMYM6O95789 1325 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 SYNJ2BP-COX16A0A087WUM0 186 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 A0A0A6YYD4 124 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 A0A0U1RQV5 110 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 FAM230AA0A1W2PPH8 454 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 NPIPA2E9PIF3 369 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 CHADO15335 359 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 CLDN3O15551 220 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 PI15O43692 258 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 MTX2O75431 263 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 TOM1L1O75674 476 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 TPM2P07951 284 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 GSTT2P0CG29 244 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 GSTT2BP0CG30 244 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 CALCBP10092 127 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 CLUP10909 449 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 HNRNPA2B1P22626 353 aaKnown RBP2.02□□□□□ -2.09
COPS3-213ENST00000577210 SLC6A8P48029 635 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 FNTAP49354 379 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 TAF6P49848 677 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 PRELPP51888 382 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 METAP1P53582 386 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 ACTR1AP61163 376 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 RPS4XP62701 263 aaKnown RBP2.02□□□□□ -2.09
COPS3-213ENST00000577210 NAAAQ02083 359 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 HSF2Q03933 536 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 FUT7Q11130 342 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 MSLNQ13421 630 aaPredicted RBP2.02□□□□□ -2.09
COPS3-213ENST00000577210 SNX1Q13596 522 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 KLF5Q13887 457 aaPredicted RBP2.02□□□□□ -2.09
COPS3-213ENST00000577210 TRIP10Q15642 601 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 MICAQ29983 383 aa2.02□□□□□ -2.09
COPS3-213ENST00000577210 TMEM44Q2T9K0 475 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms