RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 VPS33AQ96AX1 596 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 SNRNP40Q96DI7 357 aaKnown RBP9.01□□□□□ -0.97
NDE1-212ENST00000577101 LCORQ96JN0 433 aaPredicted RBP9.01□□□□□ -0.97
NDE1-212ENST00000577101 NODALQ96S42 347 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 BARD1Q99728 777 aaKnown RBP9.01□□□□□ -0.97
NDE1-212ENST00000577101 UTP23Q9BRU9 249 aaKnown RBP9.01□□□□□ -0.97
NDE1-212ENST00000577101 YIPF4Q9BSR8 244 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 RTN4RQ9BZR6 473 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 KLHL1Q9NR64 748 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 FBXO34Q9NWN3 711 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 CNOT11Q9UKZ1 510 aaKnown RBP9.01□□□□□ -0.97
NDE1-212ENST00000577101 NPFFR2Q9Y5X5 522 aa9.01□□□□□ -0.97
NDE1-212ENST00000577101 ZFYVE26Q68DK2 2539 aa9□□□□□ -0.97
NDE1-212ENST00000577101 DYTNA2CJ06 578 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PRAMEF27A3QJZ7 478 aa9□□□□□ -0.97
NDE1-212ENST00000577101 FRG2CA6NGY1 282 aa9□□□□□ -0.97
NDE1-212ENST00000577101 G3V3Y1 287 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PYCARD-AS1I3L0S3 204 aa9□□□□□ -0.97
NDE1-212ENST00000577101 FCHO1O14526 889 aa9□□□□□ -0.97
NDE1-212ENST00000577101 EMC8O43402 210 aa9□□□□□ -0.97
NDE1-212ENST00000577101 DYRK3O43781 588 aa9□□□□□ -0.97
NDE1-212ENST00000577101 NME2P1O60361 137 aa9□□□□□ -0.97
NDE1-212ENST00000577101 UGT2B11O75310 529 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ERN1O75460 977 aaKnown RBP9□□□□□ -0.97
NDE1-212ENST00000577101 SLC22A3O75751 556 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SLITRK5O94991 958 aa9□□□□□ -0.97
NDE1-212ENST00000577101 NKX2-2O95096 273 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ZIC2O95409 532 aaPredicted RBP9□□□□□ -0.97
NDE1-212ENST00000577101 NME2P22392 152 aa9□□□□□ -0.97
NDE1-212ENST00000577101 MST1P26927 711 aa9□□□□□ -0.97
NDE1-212ENST00000577101 GPC1P35052 558 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CASRP41180 1078 aa9□□□□□ -0.97
NDE1-212ENST00000577101 KIR3DL1P43629 444 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CYB561P49447 251 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ATP4BP51164 291 aa9□□□□□ -0.97
NDE1-212ENST00000577101 MVDP53602 400 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CLNS1AP54105 237 aaKnown RBP9□□□□□ -0.97
NDE1-212ENST00000577101 PRKAG1P54619 331 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CASP9P55211 416 aa9□□□□□ -0.97
NDE1-212ENST00000577101 GPR85P60893 370 aa9□□□□□ -0.97
NDE1-212ENST00000577101 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
NDE1-212ENST00000577101 DUSP5Q16690 384 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ZNF766Q5HY98 468 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PAGE3Q5JUK9 113 aa9□□□□□ -0.97
NDE1-212ENST00000577101 FNDC7Q5VTL7 733 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SLC25A25Q6KCM7 469 aa9□□□□□ -0.97
NDE1-212ENST00000577101 MFSD12Q6NUT3 480 aa9□□□□□ -0.97
NDE1-212ENST00000577101 RPUSD3Q6P087 351 aaKnown RBP9□□□□□ -0.97
NDE1-212ENST00000577101 SLC2A7Q6PXP3 512 aa9□□□□□ -0.97
NDE1-212ENST00000577101 BLOC1S3Q6QNY0 202 aa9□□□□□ -0.97
NDE1-212ENST00000577101 GK5Q6ZS86 529 aa9□□□□□ -0.97
NDE1-212ENST00000577101 OLIG3Q7RTU3 272 aa9□□□□□ -0.97
NDE1-212ENST00000577101 GALNTL5Q7Z4T8 443 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SULF2Q8IWU5 870 aa9□□□□□ -0.97
NDE1-212ENST00000577101 MSRB3Q8IXL7 192 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CYP4Z2PQ8N1L4 340 aa9□□□□□ -0.97
NDE1-212ENST00000577101 MIER2Q8N344 545 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CPSF7Q8N684 471 aaKnown RBP9□□□□□ -0.97
NDE1-212ENST00000577101 SLC15A4Q8N697 577 aa9□□□□□ -0.97
NDE1-212ENST00000577101 TEX19Q8NA77 164 aa9□□□□□ -0.97
NDE1-212ENST00000577101 FAM110BQ8TC76 370 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PAQR8Q8TEZ7 354 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ASB15Q8WXK1 588 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PIK3R3Q92569 461 aa9□□□□□ -0.97
NDE1-212ENST00000577101 TMBIM1Q969X1 311 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SPACA9Q96E40 222 aaPredicted RBP9□□□□□ -0.97
NDE1-212ENST00000577101 OMA1Q96E52 524 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SLC35A4Q96G79 324 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CCDC115Q96NT0 180 aa9□□□□□ -0.97
NDE1-212ENST00000577101 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9□□□□□ -0.97
NDE1-212ENST00000577101 EQTNQ9NQ60 294 aa9□□□□□ -0.97
NDE1-212ENST00000577101 DDX18Q9NVP1 670 aaKnown RBP9□□□□□ -0.97
NDE1-212ENST00000577101 TAS2R9Q9NYW1 312 aa9□□□□□ -0.97
NDE1-212ENST00000577101 SLAMF8Q9P0V8 285 aa9□□□□□ -0.97
NDE1-212ENST00000577101 KLHL14Q9P2G3 628 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PRODH2Q9UF12 536 aa9□□□□□ -0.97
NDE1-212ENST00000577101 TEKT2Q9UIF3 430 aa9□□□□□ -0.97
NDE1-212ENST00000577101 BTNL2Q9UIR0 455 aa9□□□□□ -0.97
NDE1-212ENST00000577101 ANAPC2Q9UJX6 822 aa9□□□□□ -0.97
NDE1-212ENST00000577101 PCDHGB6Q9Y5F9 930 aa9□□□□□ -0.97
NDE1-212ENST00000577101 TRAV17A0A0B4J275 112 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 PRSS51A0A1B0GVH4 220 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 FAM234BA2RU67 622 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 A8MVJ9 347 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 COQ9O75208 318 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 SLC25A12O75746 678 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 BCAS2O75934 225 aaPredicted RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 CPSF4O95639 269 aaKnown RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 HMGN2P05204 90 aaKnown RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 GSNP06396 782 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 S100A3P33764 101 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 PIGAP37287 484 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 RFC3P40938 356 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 DNASE1L1P49184 302 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 CCT3P49368 545 aaKnown RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 TDGF1P3P51864 188 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 POLR2JP52435 117 aaKnown RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 ARFIP2P53365 341 aa8.99□□□□□ -0.97
NDE1-212ENST00000577101 RPS26P62854 115 aaKnown RBP8.99□□□□□ -0.97
NDE1-212ENST00000577101 GNGT1P63211 74 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms