RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 PRAMEF25A6NGN4 478 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 FRG2CA6NGY1 282 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 SLC22A20A6NK97 555 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 C17orf51A8MQB3 221 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 K7EPI3 171 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 NME6O75414 186 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 S100BP04271 92 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 TBXA2RP21731 343 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 SERPINB1P30740 379 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 PIK3CBP42338 1070 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 SUCLG1P53597 346 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 HMGCS1Q01581 520 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 PLCXD2Q0VAA5 305 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 SNTA1Q13424 505 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 VEZF1Q14119 521 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 FRG1Q14331 258 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 FASTKD3Q14CZ7 662 aaKnown RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 EXOC3L2Q2M3D2 409 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 OR2A2Q6IF42 318 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 ISCA2Q86U28 154 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 TEX9Q8N6V9 391 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 FBXO36Q8NEA4 188 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 OR7G1Q8NGA0 311 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 ZNF845Q96IR2 970 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 LCORQ96JN0 433 aaPredicted RBP9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 BRINP2Q9C0B6 783 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 ALG9Q9H6U8 611 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 OPTCQ9UBM4 332 aa9.12□□□□□ -0.95
NPLOC4-220ENST00000576940 ANK2Q01484 3957 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 CXorf49A8MYA2 514 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 UBXN8O00124 270 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PGRMC1O00264 195 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PHF1O43189 567 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 EMC8O43402 210 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 REM1O75628 298 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 TP53P04637 393 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 CPMP14384 443 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PORP16435 677 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 DPP4P27487 766 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 FEN1P39748 380 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PIK3CGP48736 1102 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 ARFIP1P53367 373 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 B3GALT5-AS1P59052 145 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 DLG1Q12959 904 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PDIA2Q13087 525 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 CUL3Q13618 768 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 MORF4L2Q15014 288 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 BCL2A1Q16548 175 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 CPSF6Q16630 551 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PRICKLE4Q2TBC4 344 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 TRMT12Q53H54 448 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 BEX5Q5H9J7 111 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 OR52E8Q6IFG1 317 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 FAM180BQ6P0A1 224 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 NUDT13Q86X67 352 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 ZNF611Q8N823 705 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 ADCY4Q8NFM4 1077 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 OR5M1Q8NGP8 315 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 STAG3L4Q8TBR4 150 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 ACTRT1Q8TDG2 376 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 AKAP1Q92667 903 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 TMBIM1Q969X1 311 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 LRRC39Q96DD0 335 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PLPPR2Q96GM1 343 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 UBXN10Q96LJ8 280 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 NAP1L3Q99457 506 aaPredicted RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PINK1Q9BXM7 581 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 DKKL1Q9UK85 242 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PROCRQ9UNN8 238 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 PLLPQ9Y342 182 aa9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 MRPS18CQ9Y3D5 142 aaKnown RBP9.11□□□□□ -0.95
NPLOC4-220ENST00000576940 CR1P17927 2039 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 EFCAB8A8MWE9 144 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 SUPT3HB4E1H0 165 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 H0YIV9 168 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 HS3ST1O14792 307 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 TLX2O43763 284 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CD5LO43866 347 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 SUPT3HO75486 399 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 F12P00748 615 aaPredicted RBP9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 KLK1P06870 262 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CD8BP10966 210 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 PEPDP12955 493 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 STMN1P16949 149 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 DRD5P21918 477 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 IDUAP35475 653 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CDKN1AP38936 164 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ARL4CP56559 192 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 DUSP2Q05923 314 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 MAP4K2Q12851 820 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 CHRFAM7AQ494W8 412 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 C6orf163Q5TEZ5 329 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 LIPJQ5W064 366 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 ALKBH2Q6NS38 261 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 WFDC8Q8IUA0 241 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 LRRC8AQ8IWT6 810 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 OR52R1Q8NGF1 315 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 FNDC9Q8TBE3 224 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 WDR20Q8TBZ3 569 aa9.1□□□□□ -0.95
NPLOC4-220ENST00000576940 REPS1Q96D71 796 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms