RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C1orf50Q9BV19 199 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 RTN4RQ9BZR6 473 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 FOLH1BQ9HBA9 442 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 TIMMDC1Q9NPL8 285 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 RYDENQ9NUL5 291 aaKnown RBP7.96□□□□□ -1.14
SMG6-216ENST00000575176 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMG6-216ENST00000575176 FLRT3Q9NZU0 649 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 SPRR3Q9UBC9 169 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 SEC14L3Q9UDX4 400 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 ATP6V1HQ9UI12 483 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 NPIPA1Q9UND3 350 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 C19orf53Q9UNZ5 99 aaPredicted RBP7.96□□□□□ -1.14
SMG6-216ENST00000575176 OSGIN2Q9Y236 505 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 SLC5A6Q9Y289 635 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 WBP11Q9Y2W2 641 aaKnown RBP7.96□□□□□ -1.14
SMG6-216ENST00000575176 TMED5Q9Y3A6 229 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 RAP2CQ9Y3L5 183 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 NPFFR2Q9Y5X5 522 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 HEATR5AQ86XA9 2040 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 CELSR1Q9NYQ6 3014 aa7.96□□□□□ -1.14
SMG6-216ENST00000575176 A0A1B0GVC2 190 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 FAM166BA8MTA8 275 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 ACOX3O15254 700 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 SEC22BO75396 215 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 PPM1BO75688 479 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 SLITRK5O94991 958 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 IGKV1D-16P01601 117 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 C1QCP02747 245 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 CNR1P21554 472 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 DRD5P21918 477 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 CASP3P42574 277 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 MAGEA5P43359 124 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 PPICP45877 212 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 DIO3P55073 304 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 PHC1P78364 1004 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 ALDH6A1Q02252 535 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 PDCD2Q16342 344 aaPredicted RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 IMPG1Q17R60 797 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 GALNTL6Q49A17 601 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 GFRALQ6UXV0 394 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 LARP4Q71RC2 724 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMG6-216ENST00000575176 TRILQ7L0X0 811 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 WDR53Q7Z5U6 358 aaPredicted RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 MED12LQ86YW9 2145 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 NUDCD3Q8IVD9 361 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 DND1Q8IYX4 353 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 LIX1Q8N485 282 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 KRTCAP2Q8N6L1 136 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 ACBD4Q8NC06 268 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 OR7A2PQ8NGA2 310 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 CDC26Q8NHZ8 85 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 OMA1Q96E52 524 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 ELP4Q96EB1 424 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 CCDC120Q96HB5 630 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 LCORQ96JN0 433 aaPredicted RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 MAELQ96JY0 434 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 PHF12Q96QT6 1004 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 SECISBP2Q96T21 854 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 FAM173AQ9BQD7 235 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 LMF2Q9BU23 707 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 ANGPTL4Q9BY76 406 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 SERHL2Q9H4I8 314 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 REEP4Q9H6H4 257 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 MEAF6Q9HAF1 191 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 IL1RL2Q9HB29 575 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 SACM1LQ9NTJ5 587 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 PNPOQ9NVS9 261 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 ZNF446Q9NWS9 450 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 FAM215AQ9Y5M1 114 aa7.95□□□□□ -1.14
SMG6-216ENST00000575176 INTS1Q8N201 2190 aaKnown RBP7.95□□□□□ -1.14
SMG6-216ENST00000575176 ANKHD1Q8IWZ3 2542 aaKnown RBP7.94□□□□□ -1.14
SMG6-216ENST00000575176 POLQO75417 2590 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 KDM4EB2RXH2 506 aaPredicted RBP7.94□□□□□ -1.14
SMG6-216ENST00000575176 KLRC4-KLRK1H3BQV0 150 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 KLF11O14901 512 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 PDPK1O15530 556 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 LRRTM2O43300 516 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 ZG16O60844 167 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 PEX11AO75192 247 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 ERN1O75460 977 aaKnown RBP7.94□□□□□ -1.14
SMG6-216ENST00000575176 AGFG2O95081 481 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 MYZAPP0CAP1 466 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 ACP2P11117 423 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 LAMP1P11279 417 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 G6PDP11413 515 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 NAGAP17050 411 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 EFNA1P20827 205 aaPredicted RBP7.94□□□□□ -1.14
SMG6-216ENST00000575176 GRK2P25098 689 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 PTPN6P29350 595 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 SLC1A6P48664 564 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 NCBP2P52298 156 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG6-216ENST00000575176 MLC1Q15049 377 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 KRTCAP3Q53RY4 240 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 DCST1Q5T197 706 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 AGBL2Q5U5Z8 902 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 RTL6Q6ICC9 239 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 OGFOD2Q6N063 350 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 ZAR1Q86SH2 424 aa7.94□□□□□ -1.14
SMG6-216ENST00000575176 FJX1Q86VR8 437 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms