RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ANKRD66B4E2M5 251 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 C6orf47O95873 294 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 H1F0P07305 194 aaKnown RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ETV5P41161 510 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 GZMMP51124 257 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 YBEYP58557 167 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 RHOAP61586 193 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TCTE1Q5JU00 501 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 METAP1DQ6UB28 335 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SLITRK4Q8IW52 837 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 PGBD3Q8N328 593 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 CIDECQ96AQ7 238 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 SEC22CQ9BRL7 303 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 KLF16Q9BXK1 252 aaPredicted RBP9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TMEM168Q9H0V1 697 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 IL21Q9HBE4 155 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 GULP1Q9UBP9 304 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 TMEM5Q9Y2B1 443 aa9.07□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TRBV4-1A0A0J9YWV2 114 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TCRBV16S1A1N1A0A5B0 115 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PRAMEF12O95522 483 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PCGF2P35227 344 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CSKP41240 450 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF177Q13360 481 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 KCNC3Q14003 757 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 AKIRIN2Q53H80 203 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 MPP7Q5T2T1 576 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 HAGHLQ6PII5 290 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 NCEH1Q6PIU2 408 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 UNC5DQ6UXZ4 953 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 GPAT4Q86UL3 456 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 MEX3DQ86XN8 651 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PDZD9Q8IXQ8 264 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PM20D2Q8IYS1 436 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF454Q8N9F8 522 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 BOLLQ8N9W6 283 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF527Q8NB42 609 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 FANK1Q8TC84 345 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PPCDCQ96CD2 204 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 DPYSL5Q9BPU6 564 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TAPBPLQ9BX59 468 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TMEM138Q9NPI0 162 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 LYARQ9NX58 379 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TAS2R3Q9NYW6 316 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 MED11Q9P086 117 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 TRPC4Q9UBN4 977 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 NUBP2Q9Y5Y2 271 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF821O75541 412 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 GABRB1P18505 474 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ELK1P19419 428 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 OR1D2P34982 312 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CAPZA2P47755 286 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 FABP5Q01469 135 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CD276Q5ZPR3 534 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ELP2Q6IA86 826 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CERS6Q6ZMG9 384 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 C16orf59Q7L2K0 433 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 AUTS2Q8WXX7 1259 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SORCS2Q96PQ0 1159 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 RBP7Q96R05 134 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PELOQ9BRX2 385 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SGK2Q9HBY8 427 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 BACE2Q9Y5Z0 518 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 LRRK1Q38SD2 2015 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZAR1LA6NP61 321 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 GABRR3A8MPY1 467 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SAP18O00422 153 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CHST10O43529 356 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 FKTNO75072 461 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 KHDRBS3O75525 346 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 MT-ND4P03905 459 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ASMTP46597 345 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PITPNBP48739 271 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 DGKGP49619 791 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CLCNKAP51800 687 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 PSMA6P60900 246 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 FLI1Q01543 452 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF628Q5EBL2 1059 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ARMC12Q5T9G4 340 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 LRFN4Q6PJG9 635 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ARL9Q6T311 187 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 DEFB128Q7Z7B8 93 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SLC22A8Q8TCC7 542 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 MYO19Q96H55 970 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 OR10A4Q9H209 315 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 ZNF768Q9H5H4 540 aaKnown RBP9.06□□□□□ -0.96
CCDC40-212ENST00000574799 KCTD5Q9NXV2 234 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SLC39A1Q9NY26 324 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 SEC14L3Q9UDX4 400 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CYB5R1Q9UHQ9 305 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 CLEC4EQ9ULY5 219 aa9.06□□□□□ -0.96
CCDC40-212ENST00000574799 OLFM2O95897 454 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 LGI1O95970 557 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 ADAP00813 363 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 AMD1P17707 334 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 MMP12P39900 470 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 MAPKAPK2P49137 400 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 COX20Q5RI15 118 aa9.05□□□□□ -0.96
CCDC40-212ENST00000574799 C1orf53Q5VUE5 145 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 208.2 ms