RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZG16BQ96DA0 208 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 LRRC61Q9BV99 259 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
VPS33B-208ENST00000574755 C11orf16Q9NQ32 467 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 STARD5Q9NSY2 213 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 SELENONQ9NZV5 590 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 REV1Q9UBZ9 1251 aa13.17□□□□□ -0.3
VPS33B-208ENST00000574755 IGHV1OR15-9A0A0B4J2B8 117 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 CHURC1-FNTBB4DL54 471 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 MPZL2O60487 215 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 ZNF217O75362 1048 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 GABARAPO95166 117 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 CDK1P06493 297 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 PORP16435 677 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-208ENST00000574755 ENTPD1P49961 510 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 GAS6Q14393 721 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 MANEAQ5SRI9 462 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 ZBTB46Q86UZ6 589 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 OR2L13Q8N349 312 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 STX19Q8N4C7 294 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 DEFB119Q8N690 84 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 SIMC1Q8NDZ2 872 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 OR5T3Q8NGG3 340 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 TBC1D15Q8TC07 691 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 CDS1Q92903 461 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 ORAI3Q9BRQ5 295 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 FUZQ9BT04 418 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 OCEL1Q9H607 264 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 PRDM9Q9NQV7 894 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 NTMQ9P121 344 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.16□□□□□ -0.3
VPS33B-208ENST00000574755 FCMRO60667 390 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 PDX1P52945 283 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 SHC2P98077 582 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 ILKQ13418 452 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 RBM12BQ8IXT5 1001 aaKnown RBP13.16□□□□□ -0.3
VPS33B-208ENST00000574755 SHISA5Q8N114 240 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 FCGR1BQ92637 280 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 TANKQ92844 425 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 YIPF6Q96EC8 236 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 GAS2L1Q99501 681 aaPredicted RBP13.16□□□□□ -0.3
VPS33B-208ENST00000574755 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 FKBP14Q9NWM8 211 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 PTGFRNQ9P2B2 879 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 MKLN1Q9UL63 735 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
VPS33B-208ENST00000574755 SYT5O00445 386 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 FRS3O43559 492 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 AGR2O95994 175 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 IGFBP1P08833 259 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 ST6GAL1P15907 406 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TAS2R41P59536 307 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TBCEQ15813 527 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 DEFB110Q30KQ9 67 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TRMT12Q53H54 448 aaKnown RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 IQCHQ86VS3 1027 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 OR4K5Q8NGD3 323 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TRIM45Q9H8W5 580 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 FAM60AQ9NP50 221 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 CLN6Q9NWW5 311 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 POMT2Q9UKY4 750 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TLR4O00206 839 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 HCRTR1O43613 425 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 FGF17O60258 216 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 GALR3O60755 368 aaPredicted RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 STSP08842 583 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 CDH3P22223 829 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 LSM3P62310 102 aaKnown RBP13.15□□□□□ -0.3
VPS33B-208ENST00000574755 OCA2Q04671 838 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 ST3GAL4Q11206 333 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 HEPHL1Q6MZM0 1159 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 LINC00471Q8N535 108 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 TMEM52Q8NDY8 209 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 B3GNT7Q8NFL0 401 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 OR52P1PQ8NH57 321 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 DOK4Q8TEW6 326 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 IL4I1Q96RQ9 567 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 PRR14Q9BWN1 585 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 ITPAQ9BY32 194 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 SEMA6CQ9H3T2 930 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 KLHL28Q9NXS3 571 aa13.15□□□□□ -0.3
VPS33B-208ENST00000574755 SH3D21A4FU49 640 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 SLC22A1O15245 554 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 SLITRK5O94991 958 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
VPS33B-208ENST00000574755 MMP11P24347 488 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 AVPR1BP47901 424 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 MAZP56270 477 aaKnown RBP13.14□□□□□ -0.31
VPS33B-208ENST00000574755 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 DUSP5Q16690 384 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 INAVAQ3KP66 663 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 ZNF628Q5EBL2 1059 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 CASP12Q6UXS9 341 aa13.14□□□□□ -0.31
VPS33B-208ENST00000574755 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms