RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 GAL3ST4Q96RP7 486 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 HBEGFQ99075 208 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 FAIM2Q9BWQ8 316 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 WWTR1Q9GZV5 400 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 OR10A5Q9H207 317 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 IL1RL2Q9HB29 575 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 EMCNQ9ULC0 261 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 MEMO1Q9Y316 297 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 TIMM22Q9Y584 194 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 ZNF780BQ9Y6R6 833 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 DOPEY1Q5JWR5 2465 aa6.85□□□□□ -1.31
NUP88-205ENST00000572809 CROCCQ5TZA2 2017 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 DIDO1Q9BTC0 2240 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 GOLGA6L10A6NI86 522 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 SMIM23A6NLE4 172 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 FAM166BA8MTA8 275 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 CAPN14A8MX76 684 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 E9PLN8 166 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 G3V3Y1 287 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 UBFD1O14562 309 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 COPEO14579 308 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 PLIN3O60664 434 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 GLSO94925 669 aaPredicted RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 CLPSP04118 112 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ENO1P06733 434 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 TPOP07202 933 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 CT62P0C5K7 136 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 CPA3P15088 417 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 KRT4P19013 534 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 CSNK2A2P19784 350 aaPredicted RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 AGAP20933 346 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 S1PR1P21453 382 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 PIGAP37287 484 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 FEN1P39748 380 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 DNASE1L1P49184 302 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ALDH9A1P49189 494 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 NR0B1P51843 470 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 NAGLUP54802 743 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 GYS2P54840 703 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 DNAJB13P59910 316 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ADORA2A-AS1P86434 159 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 BTKQ06187 659 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 MAP4K2Q12851 820 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 LCP2Q13094 533 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 SLC10A1Q14973 349 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 EBPQ15125 230 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 HYAL4Q2M3T9 481 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 PRICKLE4Q2TBC4 344 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 FAM219BQ5XKK7 198 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ARHGAP11AQ6P4F7 1023 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 POMZP3Q6PJE2 187 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 FAM111BQ6SJ93 734 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 SCIMPQ6UWF3 145 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ZYG11AQ6WRX3 759 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 C3P1Q6ZMU1 363 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 MMP21Q8N119 569 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ZNF615Q8N8J6 731 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 CCDC63Q8NA47 563 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 BVESQ8NE79 360 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 OR7G1Q8NGA0 311 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 PAQR8Q8TEZ7 354 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 SPACA9Q96E40 222 aaPredicted RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 APIPQ96GX9 242 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 KCNA7Q96RP8 456 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 VKORC1Q9BQB6 163 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 TTTY12Q9BZ98 90 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ACPTQ9BZG2 426 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 BRINP2Q9C0B6 783 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 GSTO2Q9H4Y5 243 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ANKZF1Q9H8Y5 726 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 MID1IP1Q9NPA3 183 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 TUBA8Q9NY65 449 aaPredicted RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 CNIH4Q9P003 139 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 MCM8Q9UJA3 840 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 ENTPD4Q9Y227 616 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 DLGAP4Q9Y2H0 992 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 KLF2Q9Y5W3 355 aaPredicted RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 NPFFR2Q9Y5X5 522 aa6.84□□□□□ -1.31
NUP88-205ENST00000572809 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.84□□□□□ -1.31
NUP88-205ENST00000572809 GTF3C1Q12789 2109 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TRAV20A0A0B4J274 112 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 A0A0G2JMM0 328 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ATP6AP2A0A1C7CYW4 349 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 A0A1W2PPB8 328 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 GNG14A0A1W2PPG7 69 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 A0A1W2PRS3 328 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 KIR3DP1A8MWS1 328 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 NPIPA2E9PIF3 369 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 NPIPA3F8WFD2 350 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 H3BQF6 201 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ADAM10O14672 748 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 TP53I11O14683 189 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 HNRNPRO43390 633 aaKnown RBP6.83□□□□□ -1.32
NUP88-205ENST00000572809 PCDH7O60245 1069 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 CDH16O75309 829 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ATP6AP2O75787 350 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 IGHG3P01860 377 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ATP1B1P05026 303 aa6.83□□□□□ -1.32
NUP88-205ENST00000572809 ANXA4P09525 319 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms