RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 KRT39Q6A163 491 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 GPR139Q6DWJ6 353 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 RAET1GQ6H3X3 334 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 FAM72DQ6L9T8 149 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 SLC30A6Q6NXT4 461 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 IYDQ6PHW0 289 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 TRIM65Q6PJ69 517 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 FAM183BPQ6ZVS7 135 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 SETD3Q86TU7 594 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-214ENST00000572365 FAM72BQ86X60 149 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 TMEM126BQ8IUX1 230 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 LINC00346Q8IVM7 164 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 PHC2Q8IXK0 858 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 SFRP1Q8N474 314 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 B4GALNT2Q8NHY0 566 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 SHC3Q92529 594 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 ARSGQ96EG1 525 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 EGLN2Q96KS0 407 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 TAAR6Q96RI8 345 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 FAM192AQ9GZU8 254 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 HRH4Q9H3N8 390 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 THAP9Q9H5L6 903 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 MAGIXQ9H6Y5 334 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 ACSS1Q9NUB1 689 aaPredicted RBP4.98□□□□□ -1.61
SF3B3-214ENST00000572365 OLAHQ9NV23 265 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 RARRES3Q9UL19 164 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 ACSL5Q9ULC5 683 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 CDC14AQ9UNH5 594 aa4.98□□□□□ -1.61
SF3B3-214ENST00000572365 SNRNP200O75643 2136 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CCDC162PA2VCL2 907 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 GLOD5A6NK44 160 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 A8MV72 311 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 INAFM1C9JVW0 142 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ADAM20O43506 726 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 KLRC4O43908 158 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ZIC3O60481 467 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 HSF2BPO75031 334 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 GPC4O75487 556 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 SCRG1O75711 98 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 IGSF6O95976 241 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 TOMM40O96008 361 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 GSRP00390 522 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CAPN1P07384 714 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 KRT5P13647 590 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 RPL3P39023 403 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 NR4A2P43354 598 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 FASLGP48023 281 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 AMTP48728 403 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 SULT1E1P49888 294 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 GPR143P51810 404 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ABATP80404 500 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CDK3Q00526 305 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 PMP22Q01453 160 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 RAD51Q06609 339 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ELP6Q0PNE2 266 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 XRCC4Q13426 336 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 PYCR3Q53H96 274 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 C2CD6Q53TS8 623 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CYB5D1Q6P9G0 228 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 XKRXQ6PP77 449 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 HSD11B1LQ7Z5J1 315 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 C1QL2Q7Z5L3 287 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CROCCP2Q86T23 111 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ZC3HC1Q86WB0 502 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 EPHX4Q8IUS5 362 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 FOXRED2Q8IWF2 684 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CIARTQ8N365 385 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 SIDT2Q8NBJ9 832 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CHDHQ8NE62 594 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 OR8K5Q8NH50 307 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ISG20Q96AZ6 181 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 MOAP1Q96BY2 351 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 NUS1Q96E22 293 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 C14orf79Q96F83 325 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 RBM41Q96IZ5 413 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 GBP5Q96PP8 586 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 OR2M4Q96R27 311 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 USP28Q96RU2 1077 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 SMC6Q96SB8 1091 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 CPXM1Q96SM3 734 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 UCK2Q9BZX2 261 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 RBM38Q9H0Z9 239 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 ABCG8Q9H221 673 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 SLC40A1Q9NP59 571 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 PHPT1Q9NRX4 125 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 C5AR2Q9P296 337 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 MARCH4Q9P2E8 410 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 LHX3Q9UBR4 397 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 TTC7AQ9ULT0 858 aaPredicted RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 FZD10Q9ULW2 581 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 HPCAL4Q9UM19 191 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 PPP2R2CQ9Y2T4 447 aa4.97□□□□□ -1.61
SF3B3-214ENST00000572365 PTRH2Q9Y3E5 179 aaKnown RBP4.97□□□□□ -1.61
SF3B3-214ENST00000572365 HIVEP2P31629 2446 aa4.96□□□□□ -1.61
SF3B3-214ENST00000572365 PCM1Q15154 2024 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 ANK3Q12955 4377 aaKnown RBP4.96□□□□□ -1.62
SF3B3-214ENST00000572365 NKX2-6A6NCS4 301 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 USP27XA6NNY8 438 aa4.96□□□□□ -1.62
SF3B3-214ENST00000572365 PDXKO00764 312 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms