RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 SLC1A3P43003 542 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 EVX1P49640 407 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 CLDN20P56880 219 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ARHGAP19Q14CB8 494 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 CCDC58Q4VC31 144 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF765Q7L2R6 523 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 SHFQ7M4L6 423 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TMEM145Q8NBT3 493 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 KREMEN2Q8NCW0 462 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 VN1R2Q8NFZ6 395 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OR5AR1Q8NGP9 310 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PXYLP1Q8TE99 480 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ACOT12Q8WYK0 555 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 AKAP1Q92667 903 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 LINC00615Q96LM1 132 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TMEM43Q9BTV4 400 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 GTPBP2Q9BX10 602 aaKnown RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TDP1Q9NUW8 608 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 SAGE1Q9NXZ1 904 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 A0A0B4J293 547 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ISM1B1AKI9 464 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OR1F1O43749 312 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 VEGFDO43915 354 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 LILRB5O75023 590 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF780AO75290 641 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 DDX6P26196 483 aaKnown RBP eCLIP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 FRKP42685 505 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TRA2BP62995 288 aaKnown RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 TSPAN31Q12999 210 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 MLC1Q15049 377 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ANGPT1Q15389 498 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF658BQ4V348 819 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF697Q5TEC3 545 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF366Q8N895 744 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 MORN4Q8NDC4 146 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 OSTF1Q92882 214 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 RNF31Q96EP0 1072 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 GFM1Q96RP9 751 aaKnown RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 HDHD5Q9BXW7 423 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PITHD1Q9GZP4 211 aaPredicted RBP10.14□□□□□ -0.79
CCDC40-207ENST00000572253 KCNN2Q9H2S1 579 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PPP1R3EQ9H7J1 279 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 PTGFRNQ9P2B2 879 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 POLHQ9Y253 713 aa10.14□□□□□ -0.79
CCDC40-207ENST00000572253 KDM4EB2RXH2 506 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 EFCAB14O75071 495 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 AVPR1BP47901 424 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 RRAS2P62070 204 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 REEP5Q00765 189 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ST3GAL3Q11203 375 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 RPA4Q13156 261 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CLEC12AQ5QGZ9 265 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TMEM215Q68D42 235 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CD200R1LQ6Q8B3 271 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 RASSF6Q6ZTQ3 369 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 AMZ2Q86W34 360 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 NLGN4YQ8NFZ3 816 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SNAPC3Q92966 411 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 MRGPRX3Q96LB0 322 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 WFDC6Q9BQY6 131 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TRAF4Q9BUZ4 470 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 LINC00597Q9H2U6 94 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TEX10Q9NXF1 929 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 HSPB11Q9Y547 144 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 PRR23AA6NEV1 266 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 GABRPO00591 440 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 B4GALT2O60909 372 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SOD1P00441 154 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ADH1AP07327 375 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SLC6A11P48066 632 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ATP12AP54707 1039 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 KIAA1161Q6NSJ0 714 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CDC73Q6P1J9 531 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SLC37A3Q8NCC5 494 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CD99L2Q8TCZ2 262 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ATF6BQ99941 703 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ZNF717Q9BY31 904 aaPredicted RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 PLA2G12AQ9BZM1 189 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SERHL2Q9H4I8 314 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 SLC35C2Q9NQQ7 365 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 MAN2C1Q9NTJ4 1040 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ASB6Q9NWX5 421 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ENTPD4Q9Y227 616 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 H7BY64 318 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TMPRSS11DO60235 418 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 ERAL1O75616 437 aaKnown RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 FGF19O95750 216 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TAS2R38P59533 333 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 TNK1Q13470 666 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 LASP1Q14847 261 aaKnown RBP10.13□□□□□ -0.79
CCDC40-207ENST00000572253 UAP1L1Q3KQV9 507 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 Q5BKY6 102 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CNKSR3Q6P9H4 555 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 CREB3L2Q70SY1 520 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 PRAP1Q96NZ9 151 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 YIPF4Q9BSR8 244 aa10.13□□□□□ -0.79
CCDC40-207ENST00000572253 WACQ9BTA9 647 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms