RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ABCD3P28288 659 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 MPIP34949 423 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 TMED10P49755 219 aaKnown RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 RPL14P50914 215 aaKnown RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 RPL38P63173 70 aaKnown RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 CEBPEQ15744 281 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 GALNTL6Q49A17 601 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 RFTN2Q52LD8 501 aaPredicted RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 CES4AQ5XG92 561 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 ATG16L1Q676U5 607 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 ARHGAP11AQ6P4F7 1023 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 FAM9CQ8IZT9 166 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 C17orf47Q8NEP4 570 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 OR7G2Q8NG99 324 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 SPPL2AQ8TCT8 520 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 MGARPQ8TDB4 240 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 GFM2Q969S9 779 aaKnown RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 ARL8AQ96BM9 186 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 ERP27Q96DN0 273 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 ATP6V1G3Q96LB4 118 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 DOHHQ9BU89 302 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 ZNF703Q9H7S9 590 aaPredicted RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 HAO1Q9UJM8 370 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
LITAF-208ENST00000571627 HRH3Q9Y5N1 445 aa13.36□□□□□ -0.27
LITAF-208ENST00000571627 PHF3Q92576 2039 aaKnown RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 TEX15Q9BXT5 2789 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 CAPN14A8MX76 684 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 NPIPA2E9PIF3 369 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 NPIPA3F8WFD2 350 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 TP53I11O14683 189 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 SKAP2O75563 359 aaPredicted RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 PPM1BO75688 479 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 BCAS2O75934 225 aaPredicted RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 SDC1P18827 310 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 DCTP40126 519 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 ASMTP46597 345 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 NCBP2P52298 156 aaKnown RBP eCLIP13.35□□□□□ -0.27
LITAF-208ENST00000571627 CORO7P57737 925 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 BST1Q10588 318 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 HYAL4Q2M3T9 481 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 ANKRD26P1Q6NSI1 321 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 PAOXQ6QHF9 649 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 ZNF808Q8N4W9 903 aaPredicted RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 ZNF781Q8N8C0 355 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 CLHC1Q8NHS4 586 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 OMA1Q96E52 524 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 ZNF764Q96H86 408 aaPredicted RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 LCORQ96JN0 433 aaPredicted RBP13.35□□□□□ -0.27
LITAF-208ENST00000571627 RILPQ96NA2 401 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 SORT1Q99523 831 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 SH3GL2Q99962 352 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 ZFP64Q9NPA5 681 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 THAP1Q9NVV9 213 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 PRODH2Q9UF12 536 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 CACNA1DQ01668 2161 aa13.35□□□□□ -0.27
LITAF-208ENST00000571627 MYO1GB0I1T2 1018 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 HMGB1P1B2RPK0 211 aaPredicted RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 PRSS44E7EML9 344 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 AKAP10O43572 662 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TBX19O60806 448 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 PEX11AO75192 247 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TRIM3O75382 744 aaPredicted RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 SLITRK5O94991 958 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 IGHG3P01860 377 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 BCKDHAP12694 445 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 GRNP28799 593 aaKnown RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 NTSP30990 170 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 MC3RP41968 323 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 PPICP45877 212 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 PLCXD2Q0VAA5 305 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 MAD2L1Q13257 205 aaPredicted RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 CDSNQ15517 529 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 SMU1Q2TAY7 513 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 EMC4Q5J8M3 183 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TMEM107Q6UX40 140 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 NPSR1Q6W5P4 371 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 RPTNQ6XPR3 784 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TRILQ7L0X0 811 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 RPRMLQ8N4K4 120 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 OR5M9Q8NGP3 310 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TUBGCP3Q96CW5 907 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 MTERF3Q96E29 417 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 HSPBAP1Q96EW2 488 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 ZNF597Q96LX8 424 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 C3orf30Q96M34 536 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 TSSK3Q96PN8 268 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 DMRTA2Q96SC8 542 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 C20orf27Q9GZN8 174 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 SLC6A15Q9H2J7 730 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 GLIPR2Q9H4G4 154 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 REEP4Q9H6H4 257 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 LDAHQ9H6V9 325 aa13.34□□□□□ -0.27
LITAF-208ENST00000571627 ZNF395Q9H8N7 513 aaPredicted RBP13.34□□□□□ -0.27
LITAF-208ENST00000571627 FOLH1BQ9HBA9 442 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms