RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 ZNF791Q3KP31 576 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 KIAA1161Q6NSJ0 714 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 MZT2BQ6NZ67 158 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 NEIL3Q8TAT5 605 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 DEDD2Q8WXF8 326 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 COQ10AQ96MF6 247 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 AIF1LQ9BQI0 150 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 WACQ9BTA9 647 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 IL20RAQ9UHF4 553 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 ISM1B1AKI9 464 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 DVL2O14641 736 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 SPINT1O43278 529 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 PTNP21246 168 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 BTBD16Q32M84 506 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 ENTPD8Q5MY95 495 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 TFGQ92734 400 aaPredicted RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 FAM46AQ96IP4 442 aaKnown RBP16.44■□□□□ 0.22
SCARF1-205ENST00000571272 GON7Q9BXV9 100 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 GALNT9Q9HCQ5 603 aa16.44■□□□□ 0.22
SCARF1-205ENST00000571272 NUMA1Q14980 2115 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 OR1F1O43749 312 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 ERAL1O75616 437 aaKnown RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 RB1P06400 928 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 SLC1A3P43003 542 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 EVX1P49640 407 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 ZNF750Q32MQ0 723 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 MINDY4Q4G0A6 757 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 FAM209AQ5JX71 171 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 ZNF57Q68EA5 555 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 SLC30A6Q6NXT4 461 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 NUDT13Q86X67 352 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 NRSN1Q8IZ57 195 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 NUS1Q96E22 293 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 PPP1R16AQ96I34 528 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 PRRC1Q96M27 445 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 KLHL21Q9UJP4 597 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 HEATR5BQ9P2D3 2071 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 FAM170BA6NMN3 283 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 SNTNA6NMZ2 147 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 ARHGEF9O43307 516 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 LZTS3O60299 673 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 FGF9P31371 208 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 FRKP42685 505 aaPredicted RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 NCBP2P52298 156 aaKnown RBP eCLIP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 CDH11P55287 796 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 TAS2R41P59536 307 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 DEFB103AP81534 67 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 ADCK2Q7Z695 626 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 MACROD1Q9BQ69 325 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 C17orf62Q9BQA9 187 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 SOSTQ9BQB4 213 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 OR52A5Q9H2C5 316 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 RHBGQ9H310 441 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 TDP1Q9NUW8 608 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 DKK3Q9UBP4 350 aa16.43■□□□□ 0.22
SCARF1-205ENST00000571272 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
SCARF1-205ENST00000571272 TRDV1A0A1B0GX56 115 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 CPSF4LA6NMK7 179 aaKnown RBP16.42■□□□□ 0.22
SCARF1-205ENST00000571272 UBXN7O94888 489 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 PAPLNO95428 1278 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 KELP23276 732 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 DBPQ10586 325 aaPredicted RBP16.42■□□□□ 0.22
SCARF1-205ENST00000571272 KIAA1211LQ6NV74 962 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 KREMEN2Q8NCW0 462 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 OR2L2Q8NH16 312 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 OTULINQ96BN8 352 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 ZG16BQ96DA0 208 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 AMDHD1Q96NU7 426 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 SLC38A2Q96QD8 506 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 DPH7Q9BTV6 452 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 MRPS18AQ9NVS2 196 aaKnown RBP16.42■□□□□ 0.22
SCARF1-205ENST00000571272 HSPB11Q9Y547 144 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 KCNE3Q9Y6H6 103 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 GABRPO00591 440 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 NDUFS4O43181 175 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 FAM157BP0CG42 384 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 ARPC4P59998 168 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 FUT5Q11128 374 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 LRRC32Q14392 662 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 NDUFAF5Q5TEU4 345 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 UBE3DQ7Z6J8 389 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 C16orf58Q96GQ5 468 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 QRFPRQ96P65 431 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 TMEM43Q9BTV4 400 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 DPEP2Q9H4A9 486 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 TM7SF3Q9NS93 570 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 SLC23A2Q9UGH3 650 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 PCDHGB7Q9Y5F8 929 aa16.42■□□□□ 0.22
SCARF1-205ENST00000571272 LCMT2O60294 686 aaKnown RBP16.41■□□□□ 0.22
SCARF1-205ENST00000571272 LILRB3O75022 631 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 OR2B3O76000 313 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 HLA-DQB1P01920 261 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 C6P13671 934 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 GSTM3P21266 225 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 EVI2BP34910 448 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ATP6V1E1P36543 226 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 ABATP80404 500 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 CD200R1LQ6Q8B3 271 aa16.41■□□□□ 0.22
SCARF1-205ENST00000571272 DUSP18Q8NEJ0 188 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms