RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 MFSD7Q6UXD7 560 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PID1Q7Z2X4 250 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PTAR1Q7Z6K3 402 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 ABI3BPQ7Z7G0 1075 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 GALNT5Q7Z7M9 940 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 GLRX5Q86SX6 157 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CDKL3Q8IVW4 592 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 APLFQ8IW19 511 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 NAXDQ8IW45 347 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 LRRC8AQ8IWT6 810 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 SAP25Q8TEE9 199 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 ZNF473Q8WTR7 871 aaKnown RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 HTR3CQ8WXA8 447 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 TMEM190Q8WZ59 177 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 KLK6Q92876 244 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CENPTQ96BT3 561 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 NUS1Q96E22 293 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 AGAP3Q96P47 875 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 OLFM3Q96PB7 478 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 IL12RB2Q99665 862 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 DESI2Q9BSY9 194 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 MLPHQ9BV36 600 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 FRMD8P1Q9BZ68 369 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 BARHL1Q9BZE3 327 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 OSBPL8Q9BZF1 889 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 SLC25A51Q9H1U9 297 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PLK3Q9H4B4 646 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 RAD21L1Q9H4I0 556 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 HOMER3Q9NSC5 361 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 OGFRQ9NZT2 677 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 SPASTQ9UBP0 616 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 GUCA1BQ9UMX6 200 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PPIL1Q9Y3C6 166 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 HYOU1Q9Y4L1 999 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 CSNK1G3Q9Y6M4 447 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 PLXND1Q9Y4D7 1925 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 MUC22E2RYF6 1773 aaPredicted RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 RIF1Q5UIP0 2472 aaKnown RBP3.65□□□□□ -1.83
NUP88-202ENST00000570937 FAM186AA6NE01 2351 aa3.65□□□□□ -1.83
NUP88-202ENST00000570937 EP300Q09472 2414 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 ABCA7Q8IZY2 2146 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 OTOGLQ3ZCN5 2332 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 DOCK4Q8N1I0 1966 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 hCG_1818297A0A087WSY0 165 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TEX13DA0A0J9YY54 714 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 A0A0J9YYE9 177 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 C1orf232A0A0U1RR37 186 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 A8MX80 341 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GPR89AB7ZAQ6 455 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 RNF103O00237 685 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GAS8O95995 478 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TNFP01375 233 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TRBC1P01850 177 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 CSF2P04141 144 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 HLA-DQB2P05538 268 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GPR89BP0CG08 455 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 IGHV4-38-2P0DP08 117 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 CKMT2P17540 419 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 MSH3P20585 1137 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TEAD1P28347 426 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 MMP12P39900 470 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 CD86P42081 329 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GPR1P46091 355 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 RGRP47804 291 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GEMP55040 296 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 EIF3EP60228 445 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 PFN3P60673 137 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 SRP54P61011 504 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 UBE2V1Q13404 147 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 IRF4Q15306 451 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 LRRC73Q5JTD7 316 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 N4BP2L1Q5TBK1 243 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 SEL1L2Q5TEA6 688 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 NDUFAF5Q5TEU4 345 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 LRRC66Q68CR7 880 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 KIAA0930Q6ICG6 404 aaPredicted RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 PNCKQ6P2M8 343 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 ARHGAP11AQ6P4F7 1023 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 C4orf22Q6V702 233 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 RBMS3Q6XE24 437 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 MACC1Q6ZN28 852 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GCNT7Q6ZNI0 430 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GKN2Q86XP6 184 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 PTOV1Q86YD1 416 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 GALNT13Q8IUC8 556 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TMEM139Q8IV31 216 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 MCEMP1Q8IX19 187 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 EID2Q8N6I1 236 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 TEX19Q8NA77 164 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 DEFB124Q8NES8 71 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 LPCAT1Q8NF37 534 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 OR6C4Q8NGE1 309 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 PIH1D2Q8WWB5 315 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 MAIP1Q8WWC4 291 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 KRT35Q92764 455 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 AP2M1Q96CW1 435 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 IMP4Q96G21 291 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 CNDP2Q96KP4 475 aaKnown RBP3.64□□□□□ -1.83
NUP88-202ENST00000570937 BMFQ96LC9 184 aa3.64□□□□□ -1.83
NUP88-202ENST00000570937 MCCC1Q96RQ3 725 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms