RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 KAT2AQ92830 837 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 LCORQ96JN0 433 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 G6PC3Q9BUM1 346 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 TNFRSF12AQ9NP84 129 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SERHLQ9NQF3 203 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 CRIM1Q9NZV1 1036 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 VPS29Q9UBQ0 182 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 SNX6Q9UNH7 406 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 GPR55Q9Y2T6 319 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 TIMM22Q9Y584 194 aa12.62□□□□□ -0.39
GTF3C1-211ENST00000569653 FAM221AA4D161 298 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 ICOSLGO75144 302 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 SHBGP04278 402 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 CT45A8P0DMV1 189 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 CT45A9P0DMV2 189 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 BMP5P22003 454 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 MASP1P48740 699 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 TMED10P49755 219 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 NRG3P56975 720 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 FBXL19-AS1Q494R0 122 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 CT45A2Q5DJT8 189 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 NSUN5P2Q63ZY6 315 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 TMEM81Q6P7N7 255 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 GPRIN3Q6ZVF9 776 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 TDRPQ86YL5 185 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 CLYBLQ8N0X4 340 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 C9orf106Q8NAJ2 232 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 OR9A2Q8NGT5 310 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 RNF138Q8WVD3 245 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 TMBIM1Q969X1 311 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 EBPLQ9BY08 206 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 GSTO2Q9H4Y5 243 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 RYDENQ9NUL5 291 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 MCM8Q9UJA3 840 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 UTS2RQ9UKP6 389 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 RAB21Q9UL25 225 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 EXO1Q9UQ84 846 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 CAMK2AQ9UQM7 478 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 DLGAP4Q9Y2H0 992 aa12.61□□□□□ -0.39
GTF3C1-211ENST00000569653 PRAMEF25A6NGN4 478 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 GOLGA6L10A6NI86 522 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 SMIM23A6NLE4 172 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 HSPB2A8KAH6 182 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 SYT5O00445 386 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 TO15178 435 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 PCDH7O60245 1069 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 TSPAN2O60636 221 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 CDH16O75309 829 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 GLRA3O75311 464 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 PYGBP11216 843 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 HSD3B1P14060 373 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 NAGAP17050 411 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 KRT15P19012 456 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 DRD5P21918 477 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 HSD3B2P26439 372 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 UQCRC1P31930 480 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 TIMP3P35625 211 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 PPICP45877 212 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 IST1P53990 364 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 PRKAA2P54646 552 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 GAS1P54826 345 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 TRA2BP62995 288 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 PLCXD2Q0VAA5 305 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 FOXF2Q12947 444 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 CSTF3Q12996 717 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 RASA2Q15283 850 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 HSPB2Q16082 182 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 EMBQ6PCB8 327 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 NUP54Q7Z3B4 507 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 LACC1Q8IV20 430 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 CCDC116Q8IYX3 515 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 OR7G2Q8NG99 324 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 OR4N2Q8NGD1 307 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 ZNF675Q8TD23 568 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 C16orf78Q8WTQ4 265 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 EXOSC8Q96B26 276 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 L3HYPDHQ96EM0 354 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 HSPBAP1Q96EW2 488 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 VSTM2LQ96N03 204 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 BTBD9Q96Q07 612 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 GPATCH1Q9BRR8 931 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 OSBPL11Q9BXB4 747 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 OR2B2Q9GZK3 357 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 METTL7AQ9H8H3 244 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 DCDC2Q9UHG0 476 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 FBXL2Q9UKC9 423 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 MAPRE3Q9UPY8 281 aa12.6□□□□□ -0.39
GTF3C1-211ENST00000569653 A0A1W2PPM1 405 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 MBD3L4A6NDZ8 208 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 MBD3L3A6NE82 208 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 FRG2CA6NGY1 282 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 MBD3L5A6NJ08 208 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 G3V2L1 256 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 GUCY1B2O75343 617 aa12.59□□□□□ -0.39
GTF3C1-211ENST00000569653 ZWINTO95229 277 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms