RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 HDHD2Q9H0R4 259 aa16.14■□□□□ 0.17
VAC14-210ENST00000568548 LHX9Q9NQ69 397 aa16.14■□□□□ 0.17
VAC14-210ENST00000568548 MOSPD1Q9UJG1 213 aa16.14■□□□□ 0.17
VAC14-210ENST00000568548 KCND3Q9UK17 655 aa16.14■□□□□ 0.17
VAC14-210ENST00000568548 GRIP1Q9Y3R0 1128 aa16.14■□□□□ 0.17
VAC14-210ENST00000568548 CTNNB1P35222 781 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 SLC6A11P48066 632 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 NCBP2P52298 156 aaKnown RBP eCLIP16.13■□□□□ 0.175e-6■□□□□ 8.7
VAC14-210ENST00000568548 STXBP1P61764 594 aaKnown RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 GLYR1Q49A26 553 aaPredicted RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 SLC35F1Q5T1Q4 408 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 FAM27D1Q5T7N8 215 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 PIP5KL1Q5T9C9 394 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 METTL3Q86U44 580 aaKnown RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 C17orf64Q86WR6 236 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 VRK2Q86Y07 508 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 PROKR2Q8NFJ6 384 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 COL26A1Q96A83 441 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 ZNF354BQ96LW1 612 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 MED20Q9H944 212 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 MCUBQ9NWR8 336 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 MGAT4BQ9UQ53 548 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 HEATR5BQ9P2D3 2071 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 CACNA1IQ9P0X4 2223 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 RB1P06400 928 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 CHRM4P08173 479 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 NR2F6P10588 404 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 C6P13671 934 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 EFR3AQ14156 821 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 LRRC56Q8IYG6 542 aaPredicted RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 MRPL43Q8N983 215 aaKnown RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 BBS10Q8TAM1 723 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 TIFAQ96CG3 184 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 NEURL3Q96EH8 262 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 ZBED6CLQ96FA7 236 aaPredicted RBP16.13■□□□□ 0.17
VAC14-210ENST00000568548 SAP130Q9H0E3 1048 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 MAN2C1Q9NTJ4 1040 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 CLCA2Q9UQC9 943 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 IRAK3Q9Y616 596 aa16.13■□□□□ 0.17
VAC14-210ENST00000568548 C12orf71A8MTZ7 269 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 SPINT1O43278 529 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 NARSO43776 548 aaKnown RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 BSGP35613 385 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 VIPR2P41587 438 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 SNRPGP62308 76 aaKnown RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 WSCD2Q2TBF2 565 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 CEP78Q5JTW2 689 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 FAM209AQ5JX71 171 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 C12orf73Q69YU5 71 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 TMEM107Q6UX40 140 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 OR7G1Q8NGA0 311 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 OR8K5Q8NH50 307 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 TEFMQ96QE5 360 aaKnown RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 DPH7Q9BTV6 452 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 GLIPR2Q9H4G4 154 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 C6orf106Q9H6K1 298 aaPredicted RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 TRIM45Q9H8W5 580 aaPredicted RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 MN1Q10571 1320 aaPredicted RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 NOTCH4Q99466 2003 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 A0A0X1KG70 313 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 A0A1W2PPK0 400 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 LILRB5O75023 590 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 RAB36O95755 333 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 PCCBP05166 539 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 GNSP15586 552 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 CSTF1Q05048 431 aaKnown RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 FCRLBQ6BAA4 426 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 RFPL4BQ6ZWI9 263 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 MARCH9Q86YJ5 346 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 POF1BQ8WVV4 589 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 SENP5Q96HI0 755 aaPredicted RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 OR1A2Q9Y585 309 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 A0A087WUU8 490 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 PRRT4C9JH25 899 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 FAAHO00519 579 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 POLR1CO15160 346 aaPredicted RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 SCO2O43819 266 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 HMGN2P05204 90 aaKnown RBP16.12■□□□□ 0.17
VAC14-210ENST00000568548 SSR2P43308 183 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 NDUFAF5Q5TEU4 345 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 LCN1P1Q5VSP4 162 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 DTD2Q96FN9 168 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 FCRL4Q96PJ5 515 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 BEX1Q9HBH7 125 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 FZD3Q9NPG1 666 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 UCKL1Q9NWZ5 548 aa16.12■□□□□ 0.17
VAC14-210ENST00000568548 A0A0G2JMP0 313 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 MAP2K3P46734 347 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 CLCNKAP51800 687 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 SLC16A1P53985 500 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 TAS2R41P59536 307 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.11■□□□□ 0.17
VAC14-210ENST00000568548 MLLT11Q13015 90 aaPredicted RBP16.11■□□□□ 0.17
VAC14-210ENST00000568548 CAMK1Q14012 370 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 DEDD2Q8WXF8 326 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 ARRDC3Q96B67 414 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 CXorf40BQ96DE9 158 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 NUS1Q96E22 293 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 BBS4Q96RK4 519 aa16.11■□□□□ 0.17
VAC14-210ENST00000568548 ZNF607Q96SK3 696 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms