RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TUBGCP6Q96RT7 1819 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 AKAP12Q02952 1782 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 LRPPRCP42704 1394 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ROCK1Q13464 1354 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ERICH4A6NGS2 130 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 GOLGA6L19H0YKK7 550 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 DUSP11O75319 330 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ANXA9O76027 345 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 GSTA2P09210 222 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 CPA3P15088 417 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 CTNNB1P35222 781 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 CASP3P42574 277 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 KIAA1024LP59773 190 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 SYCP1Q15431 976 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 TTC31Q49AM3 519 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 CCDC152Q4G0S7 254 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 RNLSQ5VYX0 342 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 C16orf87Q6PH81 154 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 CCBE1Q6UXH8 406 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 Q6ZRG5 221 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 PARP8Q8N3A8 854 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 TMCO5AQ8N6Q1 288 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 FAM184AQ8NB25 1140 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 GLYATL1Q969I3 302 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 VMP1Q96GC9 406 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ZNF396Q96N95 335 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 PRAM1Q96QH2 718 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ST6GALNAC5Q9BVH7 336 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 SLC25A19Q9HC21 320 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 GDF3Q9NR23 364 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ARGLU1Q9NWB6 273 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 FAM120CQ9NX05 1096 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 C6orf203Q9P0P8 240 aaPredicted RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ARMCX1Q9P291 453 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 PCSK1NQ9UHG2 260 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 MAD2L2Q9UI95 211 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 TMCC3Q9ULS5 477 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 ADAMTS9Q9P2N4 1935 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 PHRF1Q9P1Y6 1649 aaKnown RBP2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 BCL9O00512 1426 aa2.93□□□□□ -1.94
HERPUD1-212ENST00000567944 AGRNO00468 2067 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 GON4LQ3T8J9 2241 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 A0A1W2PRV1 198 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 TRIM64CA6NLI5 447 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 FAM25EA8MYX2 175 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 CACNB4O00305 520 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 RTN2O75298 545 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 GOSR1O95249 250 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 TPBGLP0DKB5 382 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 PPP2R1AP30153 589 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 TRIM23P36406 574 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 NOVP48745 357 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 CCDC173Q0VFZ6 552 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 WASHC5Q12768 1159 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 PDE7AQ13946 482 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 SMC1AQ14683 1233 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 LTB4RQ15722 352 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 ZSCAN26Q16670 478 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 PARP10Q53GL7 1025 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 UNC50Q53HI1 259 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 RHBDD2Q6NTF9 364 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 SERPINA12Q8IW75 414 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 ARL6IP6Q8N6S5 226 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 SAMD12Q8N8I0 201 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 ZPLD1Q8TCW7 415 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 AGAP11Q8TF27 550 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 C5orf30Q96GV9 206 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 CXorf58Q96LI9 332 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 NAP1L3Q99457 506 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 TTYH2Q9BSA4 534 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 SLC5A7Q9GZV3 580 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 SLC26A1Q9H2B4 701 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 RWDD1Q9H446 243 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 AKIRIN1Q9H9L7 192 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 IL1RL2Q9HB29 575 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 RCOR3Q9P2K3 495 aaPredicted RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 TRPC4Q9UBN4 977 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 MLXQ9UH92 298 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 FBXW2Q9UKT8 454 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 DIMT1Q9UNQ2 313 aaKnown RBP2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 EXOC6BQ9Y2D4 811 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 ATP6V0A2Q9Y487 856 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 DLC1Q96QB1 1528 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 NAIPQ13075 1403 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 COL18A1P39060 1754 aa2.92□□□□□ -1.94
HERPUD1-212ENST00000567944 ITSN1Q15811 1721 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 ARHGEF10O15013 1369 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 ABCC11Q96J66 1382 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 GOLGA6L10A6NI86 522 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 E9PAM4 449 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 CPLX1O14810 134 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 TSPAN2O60636 221 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 SRPX2O60687 465 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 KBTBD11O94819 623 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 GAS8O95995 478 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 PDGFBP01127 241 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 GIG44P09565 113 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 FCARP24071 287 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 CCNCP24863 283 aa2.91□□□□□ -1.94
HERPUD1-212ENST00000567944 STIP1P31948 543 aaKnown RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms