RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 LACC1Q8IV20 430 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 TRIM42Q8IWZ5 723 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 PM20D2Q8IYS1 436 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 METTL4Q8N3J2 472 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 RELL2Q8NC24 303 aaPredicted RBP8.39□□□□□ -1.07
CDH13-210ENST00000567445 NAXEQ8NCW5 288 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 TNIP2Q8NFZ5 429 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 TRPC4APQ8TEL6 797 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 ISL2Q96A47 359 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 HSPBAP1Q96EW2 488 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 TMEM41AQ96HV5 264 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 NSUN5Q96P11 429 aaKnown RBP8.39□□□□□ -1.07
CDH13-210ENST00000567445 GNRHR2Q96P88 292 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 SH3GL2Q99962 352 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 LRRC1Q9BTT6 524 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 PRDM14Q9GZV8 571 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 ZBTB26Q9HCK0 441 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 C15orf41Q9Y2V0 281 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 MPDZO75970 2070 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 NF1P21359 2839 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 EXPH5Q8NEV8 1989 aa8.39□□□□□ -1.07
CDH13-210ENST00000567445 C1orf226A1L170 272 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FAM221AA4D161 298 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 GOLGA6L10A6NI86 522 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 KDM4EB2RXH2 506 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 M0R082 166 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SMIM24O75264 130 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CDH16O75309 829 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ATP1B1P05026 303 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ABCB1P08183 1280 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 INHBAP08476 426 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 COL6A2P12110 1019 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 IMPDH2P12268 514 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 NAGAP17050 411 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 BMP7P18075 431 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 S1PR1P21453 382 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ABCD3P28288 659 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 WNT3P56703 355 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CKAP4Q07065 602 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 MAP4K2Q12851 820 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FBXL19-AS1Q494R0 122 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SGO1Q5FBB7 561 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 NHSL2Q5HYW2 709 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 FBXW10Q5XX13 1052 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 NSUN5P2Q63ZY6 315 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 TIGD3Q6B0B8 471 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SLC48A1Q6P1K1 146 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 TAOK1Q7L7X3 1001 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 MILR1Q7Z6M3 343 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 PRR22Q8IZ63 422 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 C17orf53Q8N3J3 647 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 OR4F6Q8NGB9 312 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FAM222BQ8WU58 562 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 RNASE6Q93091 150 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 NTNG2Q96CW9 530 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 FOXC2Q99958 501 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 GPATCH1Q9BRR8 931 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 FUT8Q9BYC5 575 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 NXF5Q9H1B4 397 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CXXC4Q9H2H0 198 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CLEC4MQ9H2X3 399 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 ELOVL6Q9H5J4 265 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 METTL7AQ9H8H3 244 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 RASSF1Q9NS23 344 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CRIM1Q9NZV1 1036 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 XPR1Q9UBH6 696 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF629Q9UEG4 869 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 MTRF1LQ9UGC7 380 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CES1P1Q9UKY3 287 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SLC12A4Q9UP95 1085 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 CFL2Q9Y281 166 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 DTX4Q9Y2E6 619 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 SLC6A5Q9Y345 797 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 PCDHA9Q9Y5H5 950 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 A6NNC1 897 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ERAL1O75616 437 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 PPM1BO75688 479 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 OTCP00480 354 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 RPS17P08708 135 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 CSNK2A2P19784 350 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 PTPN6P29350 595 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 DEKP35659 375 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 FEN1P39748 380 aaKnown RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 SERPINB9P50453 376 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 ZNF136P52737 540 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 MGAT2Q10469 447 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 TOMM20Q15388 145 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 NNATQ16517 81 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 PRICKLE4Q2TBC4 344 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 FLYWCH1Q4VC44 716 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 EIPR1Q53HC9 387 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 WIPI1Q5MNZ9 446 aaPredicted RBP8.38□□□□□ -1.07
CDH13-210ENST00000567445 SLC30A6Q6NXT4 461 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 TMEM81Q6P7N7 255 aa8.38□□□□□ -1.07
CDH13-210ENST00000567445 POMZP3Q6PJE2 187 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms