RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 EXOSC6Q5RKV6 272 aaKnown RBP28.46■■■□□ 2.15
CTCF-203ENST00000566078 ATAD3BQ5T9A4 648 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 MARCH9Q86YJ5 346 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 ANKFN1Q8N957 763 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 SENP5Q96HI0 755 aaPredicted RBP28.46■■■□□ 2.15
CTCF-203ENST00000566078 FBXL20Q96IG2 436 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 OR8D2Q9GZM6 311 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 OLAHQ9NV23 265 aa28.46■■■□□ 2.15
CTCF-203ENST00000566078 TNFSF15O95150 251 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 CLPSP04118 112 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 CCNYL3P0C7X3 344 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 UMPSP11172 480 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 SLC7A1P30825 629 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 ENPP6Q6UWR7 440 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 CCDC80Q76M96 950 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 TIPARPQ7Z3E1 657 aaKnown RBP28.45■■■□□ 2.14
CTCF-203ENST00000566078 C16orf62Q7Z3J2 963 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 ENDOVQ8N8Q3 282 aaKnown RBP28.45■■■□□ 2.14
CTCF-203ENST00000566078 OR7G1Q8NGA0 311 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 SLC2A12Q8TD20 617 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 DAZLQ92904 295 aaKnown RBP28.45■■■□□ 2.14
CTCF-203ENST00000566078 EXD2Q9NVH0 621 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 PADI1Q9ULC6 663 aa28.45■■■□□ 2.14
CTCF-203ENST00000566078 SAMD4AQ9UPU9 718 aaKnown RBP28.45■■■□□ 2.14
CTCF-203ENST00000566078 ZNF682O95780 498 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 CYC1P08574 325 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 CLCN2P51788 898 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 PCBP3P57721 371 aaKnown RBP28.44■■■□□ 2.14
CTCF-203ENST00000566078 GLIPR1L2Q4G1C9 344 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 SFT2D3Q587I9 215 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 EID3Q8N140 333 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 METTL25Q8N6Q8 603 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 FAM86B1Q8N7N1 296 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 ZNF321PQ8N8H1 164 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 ZNF615Q8N8J6 731 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 FAM110BQ8TC76 370 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 SEPHS2Q99611 448 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 SPRY4Q9C004 299 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 PIGUQ9H490 435 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 RPS6KA6Q9UK32 745 aa28.44■■■□□ 2.14
CTCF-203ENST00000566078 CDV3Q9UKY7 258 aaKnown RBP28.44■■■□□ 2.14
CTCF-203ENST00000566078 DDAH2O95865 285 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 CRYBA2P53672 197 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 GNA13Q14344 377 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 GPAT3Q53EU6 434 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 ART5Q96L15 291 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 STACQ99469 402 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 CCM2LQ9NUG4 571 aaPredicted RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 GIN1Q9NXP7 522 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 STX18Q9P2W9 335 aaKnown RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 LIPT1Q9Y234 373 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 DTX4Q9Y2E6 619 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 PTRH2Q9Y3E5 179 aaKnown RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 AP4S1Q9Y587 144 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 PGM3O95394 542 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 BAG2O95816 211 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 ANPEPP15144 967 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 CRISP3P54108 245 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 ZNHIT3Q15649 155 aaPredicted RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 FAM69BQ5VUD6 431 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 OLIG3Q7RTU3 272 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 PATL1Q86TB9 770 aaKnown RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 COX18Q8N8Q8 333 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 C16orf52Q8NHV5 167 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 ZNF721Q8TF20 911 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 VSTM2LQ96N03 204 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 MESP1Q9BRJ9 268 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 LMF2Q9BU23 707 aaKnown RBP28.43■■■□□ 2.14
CTCF-203ENST00000566078 RUBCNLQ9H714 662 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 DUSP22Q9NRW4 184 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 ZNF451Q9Y4E5 1061 aa28.43■■■□□ 2.14
CTCF-203ENST00000566078 NINQ8N4C6 2090 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 IGHV3-20A0A0C4DH32 117 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 A8MVJ9 347 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 BRINP1O60477 761 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 PRKD3O94806 890 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 OPN1SWP03999 348 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 CHRM4P08173 479 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 MAP3K8P41279 467 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 SLC37A1P57057 533 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 SNCBQ16143 134 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 CYBRD1Q53TN4 286 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 CRB2Q5IJ48 1285 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 TBCELQ5QJ74 424 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 HEPHL1Q6MZM0 1159 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 CBLL1Q75N03 491 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 OR10Q1Q8NGQ4 319 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 GPR151Q8TDV0 419 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 HOXB13Q92826 284 aaPredicted RBP28.42■■■□□ 2.14
CTCF-203ENST00000566078 TAMM41Q96BW9 452 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 TREX2Q9BQ50 279 aaPredicted RBP28.42■■■□□ 2.14
CTCF-203ENST00000566078 UGT2B28Q9BY64 529 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 PRODH2Q9UF12 536 aa28.42■■■□□ 2.14
CTCF-203ENST00000566078 IGKV3-11P04433 115 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 GABREP78334 506 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 TMEM205Q6UW68 189 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 RNF111Q6ZNA4 994 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 BBS10Q8TAM1 723 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 CT55Q8WUE5 264 aa28.41■■■□□ 2.14
CTCF-203ENST00000566078 ADAMTS14Q8WXS8 1223 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms