RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 OR4F3Q6IEY1 312 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 JMJD6Q6NYC1 403 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FAM111BQ6SJ93 734 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 MSANTD1Q6ZTZ1 278 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF551Q7Z340 670 aaPredicted RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ARMC10Q8N2F6 343 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF615Q8N8J6 731 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 VPS37AQ8NEZ2 397 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 B3GNT7Q8NFL0 401 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 OR8K3Q8NH51 312 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ZFP28Q8NHY6 868 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 OR5P2Q8WZ92 322 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 PSMF1Q92530 271 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 POP5Q969H6 163 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FBXL20Q96IG2 436 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 CNTNAP3BQ96NU0 1288 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 OR52E6Q96RD3 313 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 NUDT9Q9BW91 350 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 CNTNAP3Q9BZ76 1288 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF160Q9HCG1 818 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 FAM120CQ9NX05 1096 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 CCDC167Q9P0B6 97 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ABCD2Q9UBJ2 740 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 AP4S1Q9Y587 144 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 DSPP15924 2871 aaKnown RBP11.74□□□□□ -0.53
SF3B3-206ENST00000565990 MGAQ8IWI9 3026 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 PTPRQQ9UMZ3 2332 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 ACACBO00763 2458 aa11.74□□□□□ -0.53
SF3B3-206ENST00000565990 MRASO14807 208 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 PDPK1O15530 556 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 DYRK3O43781 588 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 CEACAM4O75871 244 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 CLPTM1O96005 669 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 SMIM18P0DKX4 95 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 PRKAR1AP10644 381 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 UMPSP11172 480 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 HOXB6P17509 224 aaKnown RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 NT5EP21589 574 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 NTSP30990 170 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 NR1H2P55055 460 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 SLC37A1P57057 533 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 TUBA4AP68366 448 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 LSAMPQ13449 338 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 APOFQ13790 326 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF267Q14586 743 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 AGKQ53H12 422 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 AP1ARQ63HQ0 302 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 GALNT12Q8IXK2 581 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 OR2L13Q8N349 312 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF321PQ8N8H1 164 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ANKFN1Q8N957 763 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 OR7G2Q8NG99 324 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 OR9A2Q8NGT5 310 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 SLC2A12Q8TD20 617 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 HOXB13Q92826 284 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 VMP1Q96GC9 406 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 CCDC115Q96NT0 180 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ING2Q9H160 280 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 PRORYQ9H606 182 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 SERHLQ9NQF3 203 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 SIRT3Q9NTG7 399 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 TUBA8Q9NY65 449 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 TAS2R9Q9NYW1 312 aa11.73□□□□□ -0.53
SF3B3-206ENST00000565990 ZNF223Q9UK11 482 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 C19orf53Q9UNZ5 99 aaPredicted RBP11.73□□□□□ -0.53
SF3B3-206ENST00000565990 A0A1W2PP18 115 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ASPDHA6ND91 283 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ARGFXA6NJG6 315 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 C9JVG2 144 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 MASP2O00187 686 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 UPK1AO00322 258 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 HNRNPRO43390 633 aaKnown RBP11.72□□□□□ -0.53
SF3B3-206ENST00000565990 CBX7O95931 251 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ITGB2P05107 769 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 BMP2P12643 396 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 EMDP50402 254 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 HBA1P69905 142 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 MS4A2Q01362 244 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 CHAF1BQ13112 559 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 DUSP8Q13202 625 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 LTB4RQ15722 352 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 INTS11Q5TA45 600 aaKnown RBP11.72□□□□□ -0.53
SF3B3-206ENST00000565990 LCN8Q6JVE9 175 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 TMEM64Q6YI46 380 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 GK5Q6ZS86 529 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 SPATA24Q86W54 205 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 VWA5B2Q8N398 1253 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 SIMC1Q8NDZ2 872 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 APOBEC4Q8WW27 367 aaKnown RBP11.72□□□□□ -0.53
SF3B3-206ENST00000565990 KAT2AQ92830 837 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 NCLNQ969V3 563 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 ART5Q96L15 291 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 GPATCH1Q9BRR8 931 aaKnown RBP11.72□□□□□ -0.53
SF3B3-206ENST00000565990 OR8D2Q9GZM6 311 aa11.72□□□□□ -0.53
SF3B3-206ENST00000565990 OR10A5Q9H207 317 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms