RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 BHLHB9Q6PI77 547 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 Q6ZPB1 254 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 RFPL4BQ6ZWI9 263 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC35D2Q76EJ3 337 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DPPA4Q7L190 304 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PID1Q7Z2X4 250 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 GDF7Q7Z4P5 450 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CHSY1Q86X52 802 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF547Q8IVP9 402 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PGAM4Q8N0Y7 254 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF808Q8N4W9 903 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF611Q8N823 705 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PSD4Q8NDX1 1056 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MAGEC3Q8TD91 643 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DQX1Q8TE96 717 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 C2CD4CQ8TF44 421 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 GLYATL2Q8WU03 294 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 HOXB13Q92826 284 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 SCAMP4Q969E2 229 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NSMCE3Q96MG7 304 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NPY6RQ99463 290 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CLSTN3Q9BQT9 956 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PCGF1Q9BSM1 259 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SYT11Q9BT88 431 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MRI1Q9BV20 369 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MRPS26Q9BYN8 205 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ANKZF1Q9H8Y5 726 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 UGT1A10Q9HAW8 530 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ADAP2Q9NPF8 381 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NANSQ9NR45 359 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PCMTD2Q9NV79 361 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PARPBPQ9NWS1 579 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 THUMPD1Q9NXG2 353 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 SIDT1Q9NXL6 827 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 STMN3Q9NZ72 180 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 KCMF1Q9P0J7 381 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PRPF19Q9UMS4 504 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ABCG2Q9UNQ0 655 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RBM8AQ9Y5S9 174 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 GREB1Q4ZG55 1949 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 VCANP13611 3396 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DOCK3Q8IZD9 2030 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FAM90A8PA6NJQ4 464 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CLDN4O14493 209 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 INPP4BO15327 924 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CFLARO15519 480 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 AIREO43918 545 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FCMRO60667 390 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FCGR3BO75015 233 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CNTN5O94779 1100 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SUN1O94901 812 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SYNGR4O95473 234 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FAM90A13PP0C7W8 464 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 FAM90A24PP0C7X0 464 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CYP11B1P15538 503 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CMA1P23946 247 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 APEX1P27695 318 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 HSD11B1P28845 292 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NAA10P41227 235 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 WASP42768 502 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 OR2B6P58173 313 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CD81P60033 236 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CTXN1P60606 82 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SPCS3P61009 180 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SNRPEP62304 92 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 HERV-K104P63124 156 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TXNL4AP83876 142 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 VLDLRP98155 873 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TFF2Q03403 129 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DUSP2Q05923 314 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC3A1Q07837 685 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 PUDPQ08623 228 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CCNIQ14094 377 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 HIST2H2ACQ16777 129 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 EXOC3L4Q17RC7 722 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MICBQ29980 383 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MST1LQ2TV78 715 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CTU2Q2VPK5 515 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZNF750Q32MQ0 723 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ZIK1Q3SY52 487 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 MARCH8Q5T0T0 291 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 BSPRYQ5W0U4 402 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 NADSYN1Q6IA69 706 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RCSD1Q6JBY9 416 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 ARMCX5Q6P1M9 558 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 Q6ZUG5 572 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SLC16A9Q7RTY1 509 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 TBC1D26Q86UD7 250 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 SATL1Q86VE3 508 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 CIR1Q86X95 450 aaPredicted RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 HIPK1Q86Z02 1210 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MMAAQ8IVH4 418 aaKnown RBP2.88□□□□□ -1.95
CHD9-216ENST00000565803 CENPSQ8N2Z9 138 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 AMER2Q8N7J2 671 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 DDHD1Q8NEL9 900 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 OR2L5Q8NG80 312 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 RAD54LQ92698 747 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 OSTF1Q92882 214 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MYDGFQ969H8 173 aa2.88□□□□□ -1.95
CHD9-216ENST00000565803 MCHR2Q969V1 340 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms