RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CNRIP1Q96F85 164 aaPredicted RBP16.91■□□□□ 0.3
CLN6-204ENST00000564752 APOPT1Q96IL0 206 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 GNRHR2Q96P88 292 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 GIMAP4Q9NUV9 329 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 MKS1Q9NXB0 559 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 HEY2Q9UBP5 337 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 BCAP29Q9UHQ4 241 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 CFL2Q9Y281 166 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 NINQ8N4C6 2090 aa16.91■□□□□ 0.3
CLN6-204ENST00000564752 GPX3P22352 226 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 TIMP3P35625 211 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 GSTM5P46439 218 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 CDK9P50750 372 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 ART1P52961 327 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 RPP38P78345 283 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 DUSP2Q05923 314 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 ZNF763Q0D2J5 394 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 MGAT2Q10469 447 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 MAP4K2Q12851 820 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 EXOSC7Q15024 291 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 LTB4RQ15722 352 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 ACSF3Q4G176 576 aaPredicted RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 VASNQ6EMK4 673 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 GALNT18Q6P9A2 607 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 ZZZ3Q8IYH5 903 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 SAMD14Q8IZD0 417 aaPredicted RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 NAXEQ8NCW5 288 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 ADCY4Q8NFM4 1077 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 CDC26Q8NHZ8 85 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 AENQ8WTP8 325 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 C16orf78Q8WTQ4 265 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 SHCBP1LQ9BZQ2 653 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 PRDM14Q9GZV8 571 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 DNAJB12Q9NXW2 375 aaKnown RBP16.9■□□□□ 0.3
CLN6-204ENST00000564752 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
CLN6-204ENST00000564752 ZNF469Q96JG9 3925 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 ANKHD1Q8IWZ3 2542 aaKnown RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 DVL2O14641 736 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 ABCB1P08183 1280 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 ANXA4P09525 319 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 NAGAP17050 411 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 ABCD3P28288 659 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 PEX19P40855 299 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 KIR2DL3P43628 341 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 SNTB1Q13884 538 aaKnown RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 PCLAFQ15004 111 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 NNATQ16517 81 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 NHSL2Q5HYW2 709 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 POMZP3Q6PJE2 187 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 TRABD2AQ86V40 505 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 LACC1Q8IV20 430 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 PM20D2Q8IYS1 436 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 PRR22Q8IZ63 422 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 RELL2Q8NC24 303 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 TMEM41AQ96HV5 264 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 ZNF681Q96N22 645 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 ITPAQ9BY32 194 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 NXF5Q9H1B4 397 aaKnown RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 RRAGDQ9NQL2 400 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 SIRT5Q9NXA8 310 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 ZNF629Q9UEG4 869 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLN6-204ENST00000564752 LGALS13Q9UHV8 139 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 PLLPQ9Y342 182 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 V9GYY5 206 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 MAP1AP78559 2803 aaPredicted RBP16.89■□□□□ 0.29
CLN6-204ENST00000564752 ITPR3Q14573 2671 aa16.89■□□□□ 0.29
CLN6-204ENST00000564752 FAM221AA4D161 298 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 ZNF500O60304 480 aaPredicted RBP16.88■□□□□ 0.29
CLN6-204ENST00000564752 RSL1D1O76021 490 aaKnown RBP16.88■□□□□ 0.29
CLN6-204ENST00000564752 CBX7O95931 251 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 UROSP10746 265 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 PCSK2P16519 638 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 BMP5P22003 454 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 UQCRC1P31930 480 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 MASP1P48740 699 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 IST1P53990 364 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 WNT3P56703 355 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 MRPS35P82673 323 aaKnown RBP16.88■□□□□ 0.29
CLN6-204ENST00000564752 SF3B4Q15427 424 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLN6-204ENST00000564752 TIGD3Q6B0B8 471 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 TRIM46Q7Z4K8 759 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 CCDC116Q8IYX3 515 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 BANPQ8N9N5 519 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 OR52R1Q8NGF1 315 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 ZNF675Q8TD23 568 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 CAVIN3Q969G5 261 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 CTHRC1Q96CG8 243 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 SH3GL2Q99962 352 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 TNFRSF12AQ9NP84 129 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 EHD3Q9NZN3 535 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 CRIM1Q9NZV1 1036 aa16.88■□□□□ 0.29
CLN6-204ENST00000564752 PRODH2Q9UF12 536 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms