RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HSF2BPO75031 334 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 UROSP10746 265 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 FERP16591 822 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 VEGFCP49767 419 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 YBEYP58557 167 aaPredicted RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 KIAA1024LP59773 190 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ST8SIA6P61647 398 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 GNB1P62873 340 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TPM4P67936 248 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 PRKAA1Q13131 559 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 NR1D2Q14995 579 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ANGPT1Q15389 498 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TAZQ16635 292 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 KBTBD12Q3ZCT8 623 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TAF3Q5VWG9 929 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SYPL2Q5VXT5 272 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 Q6ZS52 159 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SH2D5Q6ZV89 423 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 BNIPLQ7Z465 357 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TAC4Q86UU9 113 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TMEM25Q86YD3 366 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF595Q8IYB9 648 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SPEM1Q8N4L4 309 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 HCAR2Q8TDS4 363 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 DQX1Q8TE96 717 aaKnown RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 NT5C3BQ969T7 300 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ERLEC1Q96DZ1 483 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 NSL1Q96IY1 281 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SGK494Q96LW2 274 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SERPINB11Q96P15 392 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 NPY6RQ99463 290 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 SEPHS2Q99611 448 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ASCL2Q99929 193 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 P2RY13Q9BPV8 354 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ABCG8Q9H221 673 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 PPIL3Q9H2H8 161 aaKnown RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TSPY26PQ9H489 355 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 LMAN1LQ9HAT1 526 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 AIPL1Q9NZN9 384 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TRPC4Q9UBN4 977 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 BLOC1S6Q9UL45 172 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ZFC3H1O60293 1989 aaKnown RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 ZFHX2Q9C0A1 2572 aaPredicted RBP4.36□□□□□ -1.71
LINC00254-201ENST00000563416 TRPM6Q9BX84 2022 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 GON4LQ3T8J9 2241 aa4.36□□□□□ -1.71
LINC00254-201ENST00000563416 EP300Q09472 2414 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 LRP4O75096 1905 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 SCN8AQ9UQD0 1980 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PRSS51A0A1B0GVH4 220 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 A0A1W2PRB8 838 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 C5orf52A6NGY3 159 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PRR32B1ATL7 298 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 GOLGA6L19H0YKK7 550 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TRIM77I1YAP6 450 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 K7EQS6 105 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PLOD2O00469 737 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 NTN3O00634 580 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CLDN4O14493 209 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TO15178 435 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TXNL1O43396 289 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ACSL4O60488 711 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 BCAS2O75934 225 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CLPTM1O96005 669 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 IGLV1-44P01699 117 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 RLN1P04808 185 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 GYPCP04921 128 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 APODP05090 189 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 HMBSP08397 361 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CISD3P0C7P0 127 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CCDC172P0C7W6 258 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 SP9P0CG40 484 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 GNB3P16520 340 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 HOXA6P31267 233 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 NBL1P41271 181 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 MATKP42679 507 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TNFRSF4P43489 277 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CDH11P55287 796 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 UBASH3AP57075 661 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ITGA9Q13797 1035 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 RPS6KA1Q15418 735 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 TAF13Q15543 124 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 MPPE1Q53F39 396 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 OR6B2Q6IFH4 312 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 FAM53AQ6NSI3 398 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 FAM198BQ6UWH4 519 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 KCTD9Q7L273 389 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ZNF554Q86TJ5 538 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ERICH1Q86X53 443 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PHF13Q86YI8 300 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 DEFB106AQ8N104 65 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ZBTB44Q8NCP5 570 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PAPD5Q8NDF8 572 aaKnown RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 LPCAT1Q8NF37 534 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 CCDC26Q8TAB7 109 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 WDR20Q8TBZ3 569 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 ZFAND2BQ8WV99 257 aa4.35□□□□□ -1.71
LINC00254-201ENST00000563416 SENP5Q96HI0 755 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 PRICKLE1Q96MT3 831 aaPredicted RBP4.35□□□□□ -1.71
LINC00254-201ENST00000563416 MUS81Q96NY9 551 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms