RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 AMD1P17707 334 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 MAOAP21397 527 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF10P21506 573 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DGKAP23743 735 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 HNRNPH3P31942 346 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 NUMBP49757 651 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 RAB11AP62491 216 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 IL10RBQ08334 325 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 MAD2L1Q13257 205 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 GRM7Q14831 915 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 RAB11BQ15907 218 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 RBBP7Q16576 425 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF528Q3MIS6 628 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TEDDM1Q5T9Z0 273 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 WSCD1Q658N2 575 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 SPECC1LQ69YQ0 1117 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DUS1LQ6P1R4 473 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TTC27Q6P3X3 843 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 WASH2PQ6VEQ5 465 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DCDC5Q6ZRR9 648 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 CDHR3Q6ZTQ4 885 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 BCDIN3DQ7Z5W3 292 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 CATSPER3Q86XQ3 398 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TMC8Q8IU68 726 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 MUC20Q8N307 709 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 GTPBP8Q8N3Z3 284 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DNAAF3Q8N9W5 541 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TRPV1Q8NER1 839 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 GLYATL1Q969I3 302 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TSSK2Q96PF2 358 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DUX5Q96PT3 197 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 TSG101Q99816 390 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 THAP7Q9BT49 309 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 WRAP53Q9BUR4 548 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 FSD1LQ9BXM9 530 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 NPFFR1Q9GZQ6 430 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 MFFQ9GZY8 342 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNF275Q9NSD4 429 aaPredicted RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 DDX19AQ9NUU7 478 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ACOXLQ9NUZ1 547 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ASIC5Q9NY37 505 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 NTMQ9P121 344 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 KLHL13Q9P2N7 655 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 GGA2Q9UJY4 613 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 PIGLQ9Y2B2 252 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 MGAMO43451 1857 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 ZNFX1Q9P2E3 1918 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 BAZ2BQ9UIF8 2168 aaKnown RBP4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 PLXNB2O15031 1838 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 A0A0G2JMZ2 1700 aa4.78□□□□□ -1.64
VPS35P1-201ENST00000563400 A0A0J9YYE9 177 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 HSPB6O14558 160 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SCAMP2O15127 329 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZSCAN12O43309 604 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TRAPPC3O43617 180 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 STX10O60499 249 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 B4GALT4O60513 344 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 DFFBO76075 338 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CLDN7O95471 211 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TRBC1P01850 177 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LYNP07948 512 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 UNGP13051 313 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 BMP5P22003 454 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MARK3P27448 753 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 DCTDP32321 178 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 RORAP35398 523 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CYLC1P35663 651 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 KCNK10P57789 538 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MRPS6P82932 125 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC3A1Q07837 685 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 DCAF4L1Q3SXM0 396 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SLC25A53Q5H9E4 307 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CCDC137Q6PK04 289 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 UQCC3Q6UW78 93 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF841Q6ZN19 808 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MTERF4Q7Z6M4 381 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MRPL10Q7Z7H8 261 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 PATL1Q86TB9 770 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 NELFCDQ8IXH7 590 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LRRC57Q8N9N7 239 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 FNDC5Q8NAU1 212 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CDC26Q8NHZ8 85 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ANGPTL6Q8NI99 470 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 SMPDL3BQ92485 455 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 LGALS12Q96DT0 336 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 TM4SF19Q96DZ7 209 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 THOC1Q96FV9 657 aaKnown RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ZNF419Q96HQ0 510 aaPredicted RBP4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 BOD1Q96IK1 185 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 HPDLQ96IR7 371 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 CCT8L2Q96SF2 557 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 MACROD1Q9BQ69 325 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ACBD6Q9BR61 282 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 PRRG4Q9BZD6 226 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 ROGDIQ9GZN7 287 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 OR2AG1Q9H205 316 aa4.77□□□□□ -1.65
VPS35P1-201ENST00000563400 PCDH9Q9HC56 1237 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms