RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 ZNF177Q13360 481 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ENPP2Q13822 863 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 EMC2Q15006 297 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CHI3L2Q15782 390 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PDK4Q16654 411 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 TPD52L1Q16890 204 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 LRIT3Q3SXY7 679 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 CCDC152Q4G0S7 254 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ATAD3BQ5T9A4 648 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 LCLAT1Q6UWP7 414 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 LHFPL4Q7Z7J7 247 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 KIAA1328Q86T90 577 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ZFAND4Q86XD8 727 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 OR10G7Q8NGN6 311 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PCNPQ8WW12 178 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 SHC3Q92529 594 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 LHX4Q969G2 390 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 VSTM2LQ96N03 204 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 AGAP4Q96P64 663 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 RCHY1Q96PM5 261 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ALKBH3Q96Q83 286 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNF607Q96SK3 696 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 TBCDQ9BTW9 1192 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 ZSCAN5AQ9BUG6 496 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 GON7Q9BXV9 100 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 TRIM15Q9C019 465 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PARLQ9H300 379 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 RHOJQ9H4E5 214 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 RNF41Q9H4P4 317 aaPredicted RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 NT5DC2Q9H857 520 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 RMND5AQ9H871 391 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 IL1RL2Q9HB29 575 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 FAM114A2Q9NRY5 505 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 UTP6Q9NYH9 597 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 GPR83Q9NYM4 423 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 NIP7Q9Y221 180 aaKnown RBP eCLIP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 MRPS18CQ9Y3D5 142 aaKnown RBP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 FBXO7Q9Y3I1 522 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 PARD3Q8TEW0 1356 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 FGD5Q6ZNL6 1462 aa2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 SF3B1O75533 1304 aaKnown RBP eCLIP2.68□□□□□ -1.98
SHCBP1-202ENST00000563219 IGHV3OR16-10A0A075B7F0 116 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 IQCMA0A1B0GVH7 501 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TTC26A0AVF1 554 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 RNF222A6NCQ9 220 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 IGLON5A6NGN9 336 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ASB14A6NK59 587 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 LRRC30A6NM36 301 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 WASHC1A8K0Z3 465 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 WASH3PC4AMC7 463 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 EI24O14681 340 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 IMPA2O14732 288 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TFECO14948 347 aaPredicted RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TSPAN2O60636 221 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 MTRF1O75570 445 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 IDH1O75874 414 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 NEBLO76041 1014 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 STK17BO94768 372 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 KIAA0754O94854 1291 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 UFL1O94874 794 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ANXA3P12429 323 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 GP9P14770 177 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 UQCRC2P22695 453 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 OXTRP30559 389 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 NDST2P52849 883 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 PPIAP62937 165 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 HERVK_113P63132 956 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ERVK-8P63133 956 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 PJVKQ0ZLH3 352 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ELAVL2Q12926 359 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 RIGQ13278 110 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 CFAP157Q5JU67 520 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ATF7IP2Q5U623 682 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 C1orf189Q5VU69 101 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 SLX4IPQ5VYV7 408 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 DMKNQ6E0U4 476 aaPredicted RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 NIPAL3Q6P499 406 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 KCNIP4Q6PIL6 250 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 DOK6Q6PKX4 331 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 WASH2PQ6VEQ5 465 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 GDPGP1Q6ZNW5 385 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 CCDC36Q8IYA8 594 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 METTL4Q8N3J2 472 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 GVQW1Q8N7I0 195 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 Q8NBF4 154 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ZNRF1Q8ND25 227 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 DENND6BQ8NEG7 585 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 LRRC15Q8TF66 581 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 CTNNBL1Q8WYA6 563 aaPredicted RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 OSTF1Q92882 214 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 RPL3LQ92901 407 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TADA1Q96BN2 335 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 C18orf12Q96KH6 178 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 TESK2Q96S53 571 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 LGMNQ99538 433 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 CABLES2Q9BTV7 478 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 RPP25Q9BUL9 199 aaKnown RBP2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 ERVK-6Q9BXR3 956 aa2.67□□□□□ -1.98
SHCBP1-202ENST00000563219 DHX33Q9H6R0 707 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms