RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 LOXP28300 417 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 GCKP35557 465 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 UGT2B10P36537 528 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 CORO7P57737 925 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 GPX6P59796 221 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 RPP38P78345 283 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 TNK1Q13470 666 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 ENPP6Q6UWR7 440 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 ADGRE4PQ86SQ3 457 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 NUDT13Q86X67 352 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 PPM1NQ8N819 430 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 ZNF610Q8N9Z0 462 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 OR4K14Q8NGD5 310 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 PYROXD1Q8WU10 500 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 KAT2AQ92830 837 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 WNT2BQ93097 391 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 TP53INP1Q96A56 240 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 EFHD2Q96C19 240 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 CTHRC1Q96CG8 243 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 LRRC39Q96DD0 335 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 ZNF845Q96IR2 970 aaPredicted RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 UBXN10Q96LJ8 280 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 NSUN5Q96P11 429 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 ADOQ96SZ5 270 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 OR2B2Q9GZK3 357 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 DDX31Q9H8H2 851 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 FARSBQ9NSD9 589 aaKnown RBP10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 MAT2BQ9NZL9 334 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 FLRT3Q9NZU0 649 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 FREM1Q5H8C1 2179 aa10.56□□□□□ -0.72
NSMCE1-202ENST00000561960 TCRBV9S1A1TA0A576 114 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 SLC22A20A6NK97 555 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 KERAO60938 352 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 REM1O75628 298 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 CBX7O95931 251 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 OPN1LWP04000 364 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 THBDP07204 575 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 MTHFD2P13995 350 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PORP16435 677 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 CRYGSP22914 178 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PTX3P26022 381 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 CD79BP40259 229 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PIK3CBP42338 1070 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 SUCLG1P53597 346 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 SRSF2Q01130 221 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 HMGCS1Q01581 520 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 MGAT2Q10469 447 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 GTF2H2Q13888 395 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 E2F2Q14209 437 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 FRG1Q14331 258 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 ZKSCAN8Q15776 578 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PRICKLE4Q2TBC4 344 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 GTF2H2CQ6P1K8 395 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 TBC1D1Q86TI0 1168 aaPredicted RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 CCDC25Q86WR0 208 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 WFDC8Q8IUA0 241 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 LRRC75A-AS1Q8N1F1 130 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 CEP112Q8N8E3 955 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 OR4N2Q8NGD1 307 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 OR52B6Q8NGF0 335 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 STAG3L4Q8TBR4 150 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 WDR20Q8TBZ3 569 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 UBTD2Q8WUN7 234 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 KLHL29Q96CT2 875 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PINK1Q9BXM7 581 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PIGMQ9H3S5 423 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 IPPKQ9H8X2 491 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 PFDN4Q9NQP4 134 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 NSMCE4AQ9NXX6 385 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 ZNF226Q9NYT6 803 aa10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 EXO1Q9UQ84 846 aaKnown RBP10.55□□□□□ -0.72
NSMCE1-202ENST00000561960 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 E7ESA3 106 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 H3BML4 177 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 OR7A17O14581 309 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CRLF1O75462 422 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CBR3O75828 277 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 NTN1O95631 604 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 LTA4HP09960 611 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CTAGE8P0CG41 777 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 ZNF708P17019 499 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 GP5P40197 560 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 MC3RP41968 323 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 KIR2DL2P43627 348 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 ATP5J2P56134 94 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CLDN15P56746 228 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CLDN20P56880 219 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 B3GALT5-AS1P59052 145 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 PHEXP78562 749 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 VEZF1Q14119 521 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CDKL4Q5MAI5 379 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 SH2D4BQ5SQS7 431 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CCNYL2Q5T2Q4 361 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 RAET1LQ5VY80 246 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 TTC19Q6DKK2 380 aaPredicted RBP10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 HMBOX1Q6NT76 420 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 SLC30A6Q6NXT4 461 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 PLCZ1Q86YW0 608 aa10.54□□□□□ -0.72
NSMCE1-202ENST00000561960 CTAGE4Q8IX94 777 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms