RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ERP27Q96DN0 273 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 LRRC46Q96FV0 321 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 OSBPL11Q9BXB4 747 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 ACPTQ9BZG2 426 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 GALNT9Q9HCQ5 603 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 DNAJB12Q9NXW2 375 aaKnown RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 EHD3Q9NZN3 535 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 CRIM1Q9NZV1 1036 aa14.79□□□□□ -0.04
SNX1-213ENST00000561026 EXO1Q9UQ84 846 aaKnown RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 GPR55Q9Y2T6 319 aaPredicted RBP14.79□□□□□ -0.04
SNX1-213ENST00000561026 C2orf72A6NCS6 295 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 FRG2CA6NGY1 282 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 RIPK2O43353 540 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 PCDH7O60245 1069 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 CBR3O75828 277 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 BCAS2O75934 225 aaPredicted RBP14.78□□□□□ -0.04
SNX1-213ENST00000561026 ACTL6AO96019 429 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 IL3P08700 152 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 CD1EP15812 388 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 HMOX2P30519 316 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 ASCL1P50553 236 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 ZNF136P52737 540 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 ART1P52961 327 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 RAE1P78406 368 aaKnown RBP14.78□□□□□ -0.04
SNX1-213ENST00000561026 ZNF628Q5EBL2 1059 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 SLC22A9Q8IVM8 553 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 SAMD14Q8IZD0 417 aaPredicted RBP14.78□□□□□ -0.04
SNX1-213ENST00000561026 WDSUB1Q8N9V3 476 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 RNASE6Q93091 150 aaKnown RBP14.78□□□□□ -0.04
SNX1-213ENST00000561026 L3HYPDHQ96EM0 354 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 TRIB1Q96RU8 372 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 CALHM2Q9HA72 323 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 PFDN4Q9NQP4 134 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 KLRF1Q9NZS2 232 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 STK38LQ9Y2H1 464 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 EXPH5Q8NEV8 1989 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 ITPR3Q14573 2671 aa14.78□□□□□ -0.04
SNX1-213ENST00000561026 GNG14A0A1W2PPG7 69 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 FAM221AA4D161 298 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 MBD3L4A6NDZ8 208 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 MBD3L3A6NE82 208 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 PRAMEF25A6NGN4 478 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 OR6C70A6NIJ9 312 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 MBD3L5A6NJ08 208 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 ENO1P06733 434 aaKnown RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 CPN1P15169 458 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 HTR6P50406 440 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 PKNOX1P55347 436 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 HMGCS1Q01581 520 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 ACSM2AQ08AH3 577 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 LCP2Q13094 533 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 HEPACAMQ14CZ8 416 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 SPIN4Q56A73 249 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 ACSM2BQ68CK6 577 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 IFT20Q8IY31 132 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 OR9A2Q8NGT5 310 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 MBD3L2Q8NHZ7 208 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 ZPLD1Q8TCW7 415 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 ACMSDQ8TDX5 336 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 TMBIM1Q969X1 311 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 TMCO6Q96DC7 493 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 C11orf24Q96F05 449 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 APIPQ96GX9 242 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 COL21A1Q96P44 957 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 BTBD9Q96Q07 612 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 POLDIP3Q9BY77 421 aaKnown RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 EPB41L4BQ9H329 900 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 ANKRA2Q9H9E1 313 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 SERHLQ9NQF3 203 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 RASSF1Q9NS23 344 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 FOXD3Q9UJU5 478 aaPredicted RBP14.77□□□□□ -0.04
SNX1-213ENST00000561026 MAPRE3Q9UPY8 281 aa14.77□□□□□ -0.04
SNX1-213ENST00000561026 MAP1AP78559 2803 aaPredicted RBP14.77□□□□□ -0.05
SNX1-213ENST00000561026 MED12Q93074 2177 aa14.77□□□□□ -0.05
SNX1-213ENST00000561026 ZFHX3Q15911 3703 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 GOLGA8RI6L899 631 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 ABCB7O75027 752 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 REM1O75628 298 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 GSTA1P08263 222 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CT45A8P0DMV1 189 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CT45A9P0DMV2 189 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CTSSP25774 331 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 GCKP35557 465 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 IST1P53990 364 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 RCAN2Q14206 197 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CT45A2Q5DJT8 189 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 GALNT18Q6P9A2 607 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 C16orf78Q8WTQ4 265 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 FAM222BQ8WU58 562 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 KAT2AQ92830 837 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 EXOSC8Q96B26 276 aaKnown RBP14.76□□□□□ -0.05
SNX1-213ENST00000561026 SLC35A4Q96G79 324 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 VSTM2LQ96N03 204 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 GPATCH1Q9BRR8 931 aaKnown RBP14.76□□□□□ -0.05
SNX1-213ENST00000561026 OR2B2Q9GZK3 357 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CLEC4MQ9H2X3 399 aaPredicted RBP14.76□□□□□ -0.05
SNX1-213ENST00000561026 SLC35C2Q9NQQ7 365 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 TIMM22Q9Y584 194 aa14.76□□□□□ -0.05
SNX1-213ENST00000561026 CCDC151A5D8V7 595 aa14.75□□□□□ -0.05
SNX1-213ENST00000561026 NME6O75414 186 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms