RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CDC123O75794 336 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 NDST3O95803 873 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 TGFAP01135 160 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 PF4V1P10720 104 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 SLC25A16P16260 332 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 USF1P22415 310 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 DPP4P27487 766 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 PSMB5P28074 263 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 CD79BP40259 229 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 SLC6A12P48065 614 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 TRPC1P48995 793 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 DIO1P49895 249 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 NDUFA8P51970 172 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 OR4D2P58180 307 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 TIRAPP58753 221 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 DSCR9P59020 149 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 NANOS2P60321 138 aaKnown RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 SUMO2P61956 95 aaKnown RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 XIAPP98170 497 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 CDR2Q01850 454 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 LGALS3BPQ08380 585 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 CUL4AQ13619 759 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ITGA9Q13797 1035 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 CCNIQ14094 377 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ZNF267Q14586 743 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 DPYSL2Q16555 572 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 EXOC3L4Q17RC7 722 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 BEX5Q5H9J7 111 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 MFSD4BQ5TF39 518 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 SUSD1Q6UWL2 747 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 IL20RBQ6UXL0 311 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 GBP6Q6ZN66 633 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 GPALPP1Q8IXQ4 340 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 LRRC25Q8N386 305 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 RASGEF1CQ8N431 466 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 CLDN19Q8N6F1 224 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 OR2L3Q8NG85 312 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 OR2A1Q8NGT9 310 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 OR2L8Q8NGY9 312 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 OSR1Q8TAX0 266 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 RAB3IL1Q8TBN0 382 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 FAM71BQ8TC56 605 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 SYN2Q92777 582 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 PROX1Q92786 737 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 NEUROG1Q92886 237 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 INTS12Q96CB8 462 aaKnown RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 STARD4Q96DR4 205 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 C11orf24Q96F05 449 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 DHTKD1Q96HY7 919 aaPredicted RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 PIGMQ9H3S5 423 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 TRABDQ9H4I3 376 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 FAM96AQ9H5X1 160 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ZWILCHQ9H900 591 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 LIN28AQ9H9Z2 209 aaKnown RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 PROK2Q9HC23 129 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 MED29Q9NX70 200 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 RCOR1Q9UKL0 485 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 ERVK-11Q9UQG0 969 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 B3GALT5Q9Y2C3 310 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 YARS2Q9Y2Z4 477 aaKnown RBP3.35□□□□□ -1.87
HERC1-211ENST00000560983 ATG4BQ9Y4P1 393 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 FAM169AQ9Y6X4 670 aa3.35□□□□□ -1.87
HERC1-211ENST00000560983 KIAA1549Q9HCM3 1950 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 DSCAMO60469 2012 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 C15orf38-AP3S2A0A0A6YYH1 394 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 TRBV11-1A0A0K0K1C0 115 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SLC5A10A0PJK1 596 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 LRRD1A4D1F6 860 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SAGE2PA6NJ88 616 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 A8MVJ9 347 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 C16orf97H3BN30 126 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SGK494L7N484 410 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MYO1CO00159 1063 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 PES1O00541 588 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 SPRY2O43597 315 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MFSD11O43934 449 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 B4GALT2O60909 372 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 OR2J2O76002 312 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SRP72O76094 671 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 NSA2O95478 260 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 GNA14O95837 355 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 FGF2P09038 288 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 CCL3P10147 92 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 ERVK-10P10266 1014 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 TCF4P15884 667 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 PTPN6P29350 595 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 CPOXP36551 454 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SRP14P37108 136 aaKnown RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 PIGAP37287 484 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SOX3P41225 446 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SYKP43405 635 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SSR4P51571 173 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 HILS1P60008 231 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 IRX1P78414 480 aaPredicted RBP3.34□□□□□ -1.87
HERC1-211ENST00000560983 ZBTB17Q13105 803 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MAMLD1Q13495 774 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 PNOCQ13519 176 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 MLC1Q15049 377 aa3.34□□□□□ -1.87
HERC1-211ENST00000560983 SF3B4Q15427 424 aaKnown RBP eCLIP3.34□□□□□ -1.876e-7■■■■■ 34.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms